ggKbase home page

NECEvent2014_4_6_scaffold_3654_2

Organism: NECEvent2014_4_6_Anaerococcus_vaginalis-rel_30_6

near complete RP 44 / 55 MC: 4 BSCG 41 / 51 ASCG 12 / 38
Location: comp(799..1296)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Anaerococcus obesiensis RepID=UPI0003079EB9 similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 165.0
  • Bit_score: 316
  • Evalue 1.30e-83
  • rbh
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEU12012.1}; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus vagina similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 166.0
  • Bit_score: 293
  • Evalue 1.70e-76
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 32.6
  • Coverage: 178.0
  • Bit_score: 82
  • Evalue 1.20e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Anaerococcus vaginalis → Anaerococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 498
ATGATTGGACAAAAAATTAAAAACAAAAGAAAAGAATTGAACCTTACCCAAGAATATTTGGCAAAGGAACTAAATATATCAAGACAAGCCGTATCCAAATGGGAAAAAGAAATAAGCGAGCCATCAATGGAAAATTTGGTAAAATTGTCAGAAATTTTTGGAGTAGACATAGGATATTTTAAAAATGAAAAAGAAGAATCAAAAATAAGAAAAATTTTTTGGTCATTTCTATATGCTATAATTGGCTTTGCCTTTTACCTAATTTATTATTTTGGAATAGTAGAAGGAGCCTTAAACAAAAACCCAAAAGAAATGCCATTTTTAATATTAACAATTTTTCTAGCCTTGTCAGTAATAGCCTTCCCCCAAGCCATAAAAGATATGGGAAAAAAACTAGAAAAAATAGATTATTTCACATTTTCGAAATTGGTTTTGCCAATAATTTTTATAATTTCTCCCTTTATTGTTTTTTATTATATTTTTAAAAATGAAAGCTGA
PROTEIN sequence
Length: 166
MIGQKIKNKRKELNLTQEYLAKELNISRQAVSKWEKEISEPSMENLVKLSEIFGVDIGYFKNEKEESKIRKIFWSFLYAIIGFAFYLIYYFGIVEGALNKNPKEMPFLILTIFLALSVIAFPQAIKDMGKKLEKIDYFTFSKLVLPIIFIISPFIVFYYIFKNES*