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NECEvent2014_4_6_scaffold_940_1

Organism: NECEvent2014_4_6_Clostridium_7_2_43FAA-rel_29_12_partial

near complete RP 47 / 55 MC: 5 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(2..892)

Top 3 Functional Annotations

Value Algorithm Source
cshA; DEAD-box ATP-dependent RNA helicase CshA (EC:3.6.4.13) similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 297.0
  • Bit_score: 514
  • Evalue 2.90e-143
Putative Predicted ATP-dependent RNA helicase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EMM3_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 297.0
  • Bit_score: 522
  • Evalue 2.90e-145
  • rbh
Putative Predicted ATP-dependent RNA helicase {ECO:0000313|EMBL:CDG02447.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 297.0
  • Bit_score: 522
  • Evalue 4.00e-145

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Taxonomy

Clostridium chauvoei → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 891
ATGAATTTTAAAGAATTAGGAATAAGTGAAAATATAATAAATACATTGAAAAAAAGTGGAATTACTAGTCCAACTGAAATTCAAAATAAAAGTATTAAGGAAATTATAAATGGTAAGGATGTAATAGGTGAGGCACAAACAGGAACTGGTAAAACCTTAGCATTTTTACTACCTATATTTGAGAAAATATCAATATCATCTAAGGATGTTCAATGTTTAATAATTACTCCAACTAGGGAACTTGCAATACAAATTACTGAAGAAGCTACAAAGCTAAAAGAAGGTAAGGATATTGGAGTTTTAGCAATGTATGGGGGGAAGGATGTTGGATCCCAGGTAAAGAAGTTAAGTGGTAATATTCATATGATAATTGCTACTCCAGGAAGACTTCTTGACCATATTAAGAGAAAAACTGTTGATTTAAAGAAGCTTAAGACTATCGTTATTGATGAAGCAGATCAAATGCTACTTATGGGTTTTAGAAATGAAATAGACTTAGTAATGAAGGAAAGACCTAAAAAGGTTCAAACTTTATGTTTTTCAGCAACAATGGATTCAGCAGTTAAAAAATTAGCTTATAGATATATGAATGACCCAGTAGTTATTTCAGTTAAGAAAGAAGAAGTAACTTTAGATAAAATTAAGCAAGAAGTTGTAGAAACTGTAGATAGATTAAAAAGAGAAGCTTTATGTACAGCTTTAGATGAAGATAATCCTTTTATGGCTATTATTTTCTGTAGAACAAAAAGAAGAGCTGATGAACTTGAAGTAGTAATGCATAGAAGAGGATATAACTGTAAAGTTATTCATAGTGATATACCACAAAATAAGCGTGAAAGAATTATAAAATCCTTTAGAGATGCTGATATTCAGTATTTAATAGCTACAGAT
PROTEIN sequence
Length: 297
MNFKELGISENIINTLKKSGITSPTEIQNKSIKEIINGKDVIGEAQTGTGKTLAFLLPIFEKISISSKDVQCLIITPTRELAIQITEEATKLKEGKDIGVLAMYGGKDVGSQVKKLSGNIHMIIATPGRLLDHIKRKTVDLKKLKTIVIDEADQMLLMGFRNEIDLVMKERPKKVQTLCFSATMDSAVKKLAYRYMNDPVVISVKKEEVTLDKIKQEVVETVDRLKREALCTALDEDNPFMAIIFCRTKRRADELEVVMHRRGYNCKVIHSDIPQNKRERIIKSFRDADIQYLIATD