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NECEvent2014_4_7_scaffold_2003_6

Organism: NECEvent2014_4_7_Veillonella_parvula-rel_39_396

near complete RP 48 / 55 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(4480..5940)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1316254 species="Bacteria; Firmicute similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 478.0
  • Bit_score: 936
  • Evalue 1.50e-269
DNA topoisomerase 1 n=1 Tax=Veillonella parvula HSIVP1 RepID=T0UEQ7_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 478.0
  • Bit_score: 936
  • Evalue 1.00e-269
  • rbh
DNA topoisomerase I similarity KEGG
DB: KEGG
  • Identity: 97.7
  • Coverage: 478.0
  • Bit_score: 923
  • Evalue 3.40e-266

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Taxonomy

Veillonella parvula → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1461
GTGATATACTTGTCCATTAAACGATCTATCGTTATTGGCGAGCCGAAAGCAGCTAGTACTAGTAATGACACAAAAAAGAAAAATACTAAGAAAGAAAGTACTACGATAAAGCGTAAGGTAGCTAAGGAAGCCCTTACTCCAATGGGGATTGTACGGGATAAATCTGTACTACAAACTTCAATGCCACCGGAGCAACGCGAACCTCGCGTATATAATCCTGATGGCAAAGTATTAGTAATCGTAGAGTCTCCTGCTAAATCTAAAACAATTGAAAAATTCTTAGGTCCCAACTACGTTGTAAAAGCGAGTATGGGCCATTTACGAGATTTGCCTAAATCTCAAATGGGCATCGATATAGAGCATGATTTCACGCCGCGCTATAGTAATTTGGTAACACGTAAAAAGGTTATTGATGAACTAGTTTCTTATGCTGATGAAAGCAGTGCCGTATTGCTTGCAACTGACCCTGACCGTGAAGGGGAAGCTATTTCTTGGCATTTAGCGTACATTCTAAATGTAGATCCTACATCTACATGCCGTATTACGTTCAATGAGATTACTAAAAATGCGGTAGCAGAAGCATTAGGTTCTCCACGTACTATCGATATGAACATGGTAGATGCTCAACAAGCACGCCGTGTATTAGACCGTATCGTAGGCTATAAATTGAGTCCTTTATTATGGAAAAAGGTTTGTAAAGGCCTTAGTGCAGGTCGTGTGCAATCCGTTGCAGTTCGACTTATCTGTGAAAGAGAGCGAGAAATTCAAGCTTTCGTGCCACAAGAATATTGGACTATTGAAGGCAATTTTGAAACGCCTAAAAAAGAGGCTTTCACAGCGGAATTAACCCATATTAAAGGTGAAAAAATCGATATTACTACTGAAAGTGATGCACAAGCCATAGTTGATGCTATTGGCAATGAAGATGCAGTAGTGACTAATATTGAAAAGCGCAAGCGTTCTCGTAAAGCGGCACCTCCATTTACAACATCTACCTTGCAACAAGATGGTGTGCGTAAATTGAACTTTGGTGCTAAGCGTACGATGATGATCGCCCAACATTTATATGAAGGTTTAGAAATTGGCTCCTATGGCCACGTAGGTTTGATTACATATATGCGTACAGACTCTACGCGTATCTCTAAAGAAATGCAAGCTATGGCTAAGGACTTTATTCTTCGCAATTATGGGGAAGACTATTATCCGTCTAAACCAAATGTGTACGGCTCTAAGGGTTCTGCACAAGATGCGCATGAGGCTATTCGTCCTACATCTCTCGAGTTAACACCTAAAATGGTGGAACCATTCTTGAGTCGTGATGAACTTAAGCTATATACGTTGATTTGGAATCGTTTTATGGCTAGCCAAATGGCGCCGCAACTAAATGAATCCACAACGATAGAGTTGAATGTAAAAGATGACTATACATTTAAAGCGACTGCTTGGCATTGGTCGCCCTAG
PROTEIN sequence
Length: 487
VIYLSIKRSIVIGEPKAASTSNDTKKKNTKKESTTIKRKVAKEALTPMGIVRDKSVLQTSMPPEQREPRVYNPDGKVLVIVESPAKSKTIEKFLGPNYVVKASMGHLRDLPKSQMGIDIEHDFTPRYSNLVTRKKVIDELVSYADESSAVLLATDPDREGEAISWHLAYILNVDPTSTCRITFNEITKNAVAEALGSPRTIDMNMVDAQQARRVLDRIVGYKLSPLLWKKVCKGLSAGRVQSVAVRLICEREREIQAFVPQEYWTIEGNFETPKKEAFTAELTHIKGEKIDITTESDAQAIVDAIGNEDAVVTNIEKRKRSRKAAPPFTTSTLQQDGVRKLNFGAKRTMMIAQHLYEGLEIGSYGHVGLITYMRTDSTRISKEMQAMAKDFILRNYGEDYYPSKPNVYGSKGSAQDAHEAIRPTSLELTPKMVEPFLSRDELKLYTLIWNRFMASQMAPQLNESTTIELNVKDDYTFKATAWHWSP*