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NECEvent2014_4_7_scaffold_5252_2

Organism: NECEvent2014_4_7_Veillonella_parvula-rel_39_396

near complete RP 48 / 55 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(157..429)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L162_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 180
  • Evalue 1.10e-42
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EGL77066.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parv similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 180
  • Evalue 1.50e-42
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 90.0
  • Bit_score: 176
  • Evalue 3.30e-42

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Taxonomy

Veillonella parvula → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 273
ATGGAAACGTTAGATCAATATTTAGAAAAGCAATTAAAAAATCCGAAGTTTAAAAAAGAGTGGGATGCGTTAGATGATGAATATCAAATCATTCAGAATATTGTAGAGGCTCGCCTTGCAGCTCATATGACGCAAATGCAATTATCTGAATTAACTGGTATTACACAATCCGATATTAGCAAGATTGAAAATGGAAATGGAAATCCATCTTTAAAAACTTTACAGAAGATAGCCCGTGCTTTTGGGAAGAAACTAAAGATTGAATTTGTATAA
PROTEIN sequence
Length: 91
METLDQYLEKQLKNPKFKKEWDALDDEYQIIQNIVEARLAAHMTQMQLSELTGITQSDISKIENGNGNPSLKTLQKIARAFGKKLKIEFV*