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NECEvent2014_4_7_scaffold_142

Alias: 174_007_scaffold_142

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_142_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(800..2203)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YVB1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31380.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ErfK family protein
NECEvent2014_4_7_scaffold_142_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2492..3211)
DNA (720bp) protein (240aa)
Phosphohistidinol phosphatase n=2 Tax=Clostridium butyricum RepID=M8KAK6_CLOBU rbh
Putative histidinol phosphatase {ECO:0000313|EMBL:KJZ87638.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;
hydrolase
NECEvent2014_4_7_scaffold_142_3
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3440..4396)
DNA (957bp) protein (319aa)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:KJZ85073.1}; EC=1.1.1.95 {ECO:0000313|EMBL:KJZ85073.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
hprA; glycerate dehydrogenase HprA (EC:1.1.1.29)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AGX4_CLOBU rbh
NECEvent2014_4_7_scaffold_142_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4679..7042)
DNA (2364bp) protein (788aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
glgP1; glycogen phosphorylase GlgP (EC:2.4.1.1)
Phosphorylase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A4I7_CLOBU rbh
NECEvent2014_4_7_scaffold_142_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7042..8535)
DNA (1494bp) protein (498aa)
4-alpha-glucanotransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JH12_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87701.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
4-alpha-glucanotransferase
NECEvent2014_4_7_scaffold_142_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8567..9577)
DNA (1011bp) protein (337aa)
HTH-type transcriptional regulator MalR n=4 Tax=Clostridium butyricum RepID=B1QWY2_CLOBU rbh
HTH-type transcriptional regulator MalR {ECO:0000313|EMBL:EEP55187.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
HTH-type transcriptional regulator MalR
NECEvent2014_4_7_scaffold_142_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9964..10908)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUW7_CLOBU rbh
Regulator of polyketide synthase expression {ECO:0000313|EMBL:KJZ87700.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp
PucR family transcriptional regulator
NECEvent2014_4_7_scaffold_142_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10958..12067)
DNA (1110bp) protein (370aa)
Maltose/maltodextrin ABC transporter ATP-binding protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGX7_CLOBU rbh
Maltose/maltodextrin ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ31387.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
ABC transporter
NECEvent2014_4_7_scaffold_142_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12409..13137)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A4J2_CLOBU rbh
Zinc ABC transporter, inner membrane permease protein ZnuB {ECO:0000313|EMBL:KJZ97675.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
transglutaminase domain protein
NECEvent2014_4_7_scaffold_142_10
unknown

Not on your lists

comp(13487..13705)
DNA (219bp) protein (73aa)

This feature has no annotations

NECEvent2014_4_7_scaffold_142_11
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13671..13982)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJZ85069.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
Domain of unknown function (DUF1814).
NECEvent2014_4_7_scaffold_142_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14113..14703)
DNA (591bp) protein (197aa)
Uncharacterized protein n=2 Tax=Bacillus coagulans RepID=G2TK09_BACCO
Flagellin {ECO:0000313|EMBL:KJZ97661.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_4_7_scaffold_142_13
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15067..15315
DNA (249bp) protein (83aa)
Putative RNA polymerase sigma factor n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UQS6_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:KJZ85078.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
NECEvent2014_4_7_scaffold_142_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15317..16006)
DNA (690bp) protein (230aa)
linear gramicidin dehydrogenase LgrE (EC:1.1.-.-)
Linear gramicidin dehydrogenase LgrE n=1 Tax=Clostridium botulinum (strain Kyoto / Type A2) RepID=C1FRI1_CLOBJ rbh
Putative thioesterase {ECO:0000313|EMBL:KJZ87611.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_4_7_scaffold_142_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16006..16722)
DNA (717bp) protein (239aa)
4'-phosphopantetheinyl transferase sfp (EC:2.7.8.-)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002FD0985 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97667.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_4_7_scaffold_142_16
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16996..17784)
DNA (789bp) protein (263aa)
trans-aconitate 2-methyltransferase (EC:2.1.1.144)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KNN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS47948.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
NECEvent2014_4_7_scaffold_142_17
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17938..18984)
DNA (1047bp) protein (349aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R064_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EPR10818.1}; Flags: Fragment;; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostrid
hypothetical protein
NECEvent2014_4_7_scaffold_142_18
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19013..24112)
DNA (5100bp) protein (1700aa)
Malonyl CoAacyl carrier protein transacylase {ECO:0000313|EMBL:KJZ82722.1}; EC=2.3.1.39 {ECO:0000313|EMBL:KJZ82722.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
hypothetical protein n=1 Tax=Burkholderia sp. JPY251 RepID=UPI000362A575 rbh
amino acid adenylation protein
NECEvent2014_4_7_scaffold_142_19
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24209..24460)
DNA (252bp) protein (84aa)
Acyl carrier protein n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I5H2_CLOCE
hypothetical protein
Acyl carrier protein {ECO:0000256|RuleBase:RU003545, ECO:0000256|SAAS:SAAS00242747}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source
NECEvent2014_4_7_scaffold_142_20
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24556..27288)
DNA (2733bp) protein (911aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0002DDDDE1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ82843.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
PdpB protein
NECEvent2014_4_7_scaffold_142_21
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27285..28466)
DNA (1182bp) protein (394aa)
MFS permease n=1 Tax=Oceanibaculum indicum P24 RepID=K2J3Z2_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97659.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_4_7_scaffold_142_22
unknown

Not on your lists

comp(28498..29343)
DNA (846bp) protein (282aa)

This feature has no annotations

NECEvent2014_4_7_scaffold_142_23
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29340..30371)
DNA (1032bp) protein (344aa)
tungsten-containing aldehyde ferredoxin oxidoreductase cofactor modifying protein Tax=GWF2_Bacteroidetes_35_48_curated
radical SAM protein id=5802418 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
Radical SAM domain protein
NECEvent2014_4_7_scaffold_142_24
unknown

Not on your lists

comp(30469..30696)
DNA (228bp) protein (76aa)

This feature has no annotations

NECEvent2014_4_7_scaffold_142_25
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30735..31679
DNA (945bp) protein (315aa)
Putative uncharacterized protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TCT5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ82848.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
eamA-like transporter family protein
NECEvent2014_4_7_scaffold_142_26
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31886..32086)
DNA (201bp) protein (67aa)
Transposase, mutator type n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MA86_9CLOT
Transposase, mutator type {ECO:0000313|EMBL:KJZ82717.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
transposase, mutator type
NECEvent2014_4_7_scaffold_142_27
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32129..32977)
DNA (849bp) protein (283aa)
Transposase, mutator type n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MA86_9CLOT
Transposase, mutator type {ECO:0000313|EMBL:KJZ82717.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
transposase, mutator type
NECEvent2014_4_7_scaffold_142_28
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32986..33123)
DNA (138bp) protein (46aa)
Transposase Mu n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FX98_CLOPA
transposase, mutator type
Transposase, mutator type {ECO:0000313|EMBL:AGF54854.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylaceto
NECEvent2014_4_7_scaffold_142_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33320..33922
DNA (603bp) protein (201aa)
Accessory gene regulator B n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LQ28_CLOB8 rbh
Accessory regulator B {ECO:0000313|EMBL:KJZ87720.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
accessory gene regulator B
NECEvent2014_4_7_scaffold_142_30
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33882..34001
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U8R6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:AJG97000.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium
Displaying items 1-30 of 32 in total

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