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NECEvent2014_4_7_scaffold_2178_1

Organism: NECEvent2014_4_7_Clostridium_perfringens_28_5

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 2
Location: comp(2..550)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase, GyrB/ParE subunit family n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UZ35_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 183.0
  • Bit_score: 376
  • Evalue 2.00e-101
parE; DNA topoisomerase IV subunit B similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 183.0
  • Bit_score: 376
  • Evalue 5.80e-102
DNA topoisomerase II (N-terminal region) {ECO:0000313|EMBL:EDS80330.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfri similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 183.0
  • Bit_score: 376
  • Evalue 2.90e-101

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 549
ATGAGCAATAAAAATAACAATTATGATGTTACCTCTTTAACTTCTTTAGAAAAGTTAGAACCAGTAAGAGTAAGACCAGGAATGTACATAGGTTCTACAGGAAGCAAGGGACTTCATCATTGTATATGGGAAATATTAGATAACTCTATAGACGAAATATCAAATGGATATGGAAATAAGGCTAAGGTTATTTTAAATAAAGATAAAAGTGTAACTGTAATAGATAATGGAAGAGGAATTCCTACGGGAATGCATCCAATAAAGAAAAAAACTGGTGTTGAAATGGTATTTACAGAGCTTCACACTGGTGGTAAGTTTAATAACCAAAACTATAAGACTTCTGGAGGACTTCATGGTGTTGGAGCAGCTGTTGTTAATGCCTTATCAAGATGGCTAGAAGTTGAAGTAAAACAAAATGGAAAGATATATAGACAAAGATTTGAATATGCTTATGACAAAGAGCTTAAAAAAGATATGCCAGGAACACCAGTAACTCCATTAGAGGTAGTAGGAGAATCTAAGGAAACTGGAACAAAGGTTACTTTTTTA
PROTEIN sequence
Length: 183
MSNKNNNYDVTSLTSLEKLEPVRVRPGMYIGSTGSKGLHHCIWEILDNSIDEISNGYGNKAKVILNKDKSVTVIDNGRGIPTGMHPIKKKTGVEMVFTELHTGGKFNNQNYKTSGGLHGVGAAVVNALSRWLEVEVKQNGKIYRQRFEYAYDKELKKDMPGTPVTPLEVVGESKETGTKVTFL