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NECEvent2014_4_7_scaffold_2814_1

Organism: NECEvent2014_4_7_Clostridium_perfringens_28_5

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 2
Location: 206..1666

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=451755 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 486.0
  • Bit_score: 943
  • Evalue 9.10e-272
Transcription termination factor Rho n=8 Tax=Clostridium perfringens RepID=H7CYN1_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 486.0
  • Bit_score: 945
  • Evalue 2.90e-272
  • rbh
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 486.0
  • Bit_score: 944
  • Evalue 1.10e-272

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1461
TTGAATATAGAACAATATGAAAATATGACTTTAGTTCAGCTAAAAGAGCAGGCTAAAGAATTAGGAATAAAAAATATAAGTAAAAAGAAAAAAAGCGAATTAATTGAGGAATTAAAAGCTGAATTCAATAAACAAAATAGCAATACTAAAGTAATACATAAAGACGGTGTTATTTTAAGAGAAAAAATATCTCAAAAAGAGCAAGGTGGAAATAAAGAAAGTTTTTCTGGTGAAAGAGTAGTTAGAAATAGCAATAATTATAATAACAATAATAGTAATTATAATAATTCAAATGATGAAGGAAAAAAAGAGCAATTAAAGGACATGATAAGTTCATCAGACTCTGCTAAGGGAATACTTGAAATACTAGATAATAATAATTTTGGTTTTTTAAGATGTAGAAATTATTTAACAAGTGAAGATGATATATATGTTTCTCCATCACAAATAAGAAGATTTGGATTAAGAACTGGGGACGAAGTCCAAGGTAAAGTTAGAATACCAAAGGATGGAGAAAAGTTTAAAGCTTTACTTTATGTAGAGAGAGTAAATGGTGAAAGTCCTGAAAAAGCAGTTGGAAGAAAGAAATTTGAAGAGTTAACACCAATATATCCAAAAGAGAGATTAAGACTTGAGACTGAAAATGGAAGAGATTTAAGTTCAAGACTTATGGATATAATTTGTCCAATAGGTAAGGGACAAAGGGGGATGATAGTTGCACCACCTAAGGCTGGAAAAACAACTCTTTTAAAAAGAATAGCTCAAAACATATCAAAGAATAATCCTGAAGTTAAACTTATAGTACTTTTAATAGATGAAAGACCAGAAGAAGTAACGGATATGAAGAGAAGTATAGATGGAGAAGTAATCTATTCAACTTTTGATGAAGAACCACAAAACCATGCTAAAGTTTCAAGTATAGTATTAGAAAGAGCTAAAAGAATGGTTGAACAAGGAAGAGATGTAGTTATCTTAATGGATTCTTTAACAAGATTATCAAGAGCTTATAATTTAACAGTCACTCCAGCTGGAAGAACTTTATCAGGTGGATTAGATCCAGGGGCACTTATAATGCCTAAGAAATTCTTTGGAGCAGCTAGAAATTTAGAAGAGGGCGGAAGTTTAACAATTTTAGCAAGTTCTTTAGTTGATACAGGAAGTAGAATGGATGATATGATTTTTGAAGAGTTTAAGGGTACTGGAAATATGGAGGTACATTTAGATAGAAAGCTTCAAGAGAGAAGAATATTCCCAGCTATAGATATTTATAAATCTGGTACTAGAAAAGAAGACTTATTATTTAATGAAGAAGAAAGAGAAGCTTCATATAAAATAAGAAGAGTATTACAAAAGGAAAATAATATAGAGGATGTAGCTGAAAAGCTTATAAATTTATTATCAAAAACAAAAAATAATAAAGAGTTTTTACAAGTTGTTTTAAAAAGCAATTTAGAAAATTAA
PROTEIN sequence
Length: 487
LNIEQYENMTLVQLKEQAKELGIKNISKKKKSELIEELKAEFNKQNSNTKVIHKDGVILREKISQKEQGGNKESFSGERVVRNSNNYNNNNSNYNNSNDEGKKEQLKDMISSSDSAKGILEILDNNNFGFLRCRNYLTSEDDIYVSPSQIRRFGLRTGDEVQGKVRIPKDGEKFKALLYVERVNGESPEKAVGRKKFEELTPIYPKERLRLETENGRDLSSRLMDIICPIGKGQRGMIVAPPKAGKTTLLKRIAQNISKNNPEVKLIVLLIDERPEEVTDMKRSIDGEVIYSTFDEEPQNHAKVSSIVLERAKRMVEQGRDVVILMDSLTRLSRAYNLTVTPAGRTLSGGLDPGALIMPKKFFGAARNLEEGGSLTILASSLVDTGSRMDDMIFEEFKGTGNMEVHLDRKLQERRIFPAIDIYKSGTRKEDLLFNEEEREASYKIRRVLQKENNIEDVAEKLINLLSKTKNNKEFLQVVLKSNLEN*