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NECEvent2014_4_7_scaffold_5260_1

Organism: NECEvent2014_4_7_Peptoniphilus_harei-rel_34_5

near complete RP 43 / 55 MC: 2 BSCG 43 / 51 ASCG 11 / 38 MC: 2
Location: comp(3..518)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI00030187EC similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 172.0
  • Bit_score: 320
  • Evalue 9.50e-85
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus hare similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 172.0
  • Bit_score: 301
  • Evalue 6.40e-79
sigA; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 178.0
  • Bit_score: 222
  • Evalue 1.30e-55

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Taxonomy

Peptoniphilus harei → Peptoniphilus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 516
ATGAGTGAAAATTTAAAAAATAAGGATTCGATTGAATCAATAACAGAGCAGCTTTTAAAAGATGGCAAAAAAGATGGGAATCTTAGCTATGATGAAATAGGTGATGCCTTTGAAAAGTTTCAAATTGATTCTGACGATATAGATGAATTATACAAGACCTTTGAAAAGGAAGGTATCAATTTAGTTGACAAAAAAGATTTAAAAGATGATGAAGAAGAAGAAGTTGATGTTACTAAAGAGGACTTGTCAGTGCCTAAGGGTGTCACTGTAGACGATCCTGTCAGGATGTACTTAAAGGAAATTGGAAAAATTTCTTTACTTACTGCTGAAGAAGAAGTTGAAATTGCAAAGAGAATGGAAGCAGGAGATGAGTCAGCGAAAAAAGAACTTGCTGAAGCCAATTTAAGACTTGTAGTTTCCATTGCAAAGAGATATGTTGGTAGGGGCATGAGCTTTTTGGATTTAATTCAAGAGGGAAATCTGGGCCTTATGAAAGCTGTTGACAAGTTCGACTAC
PROTEIN sequence
Length: 172
MSENLKNKDSIESITEQLLKDGKKDGNLSYDEIGDAFEKFQIDSDDIDELYKTFEKEGINLVDKKDLKDDEEEEVDVTKEDLSVPKGVTVDDPVRMYLKEIGKISLLTAEEEVEIAKRMEAGDESAKKELAEANLRLVVSIAKRYVGRGMSFLDLIQEGNLGLMKAVDKFDY