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NECEvent2014_5_2_scaffold_2854_1

Organism: NECEvent2014_5_2_Actinomyces_60_7

partial RP 47 / 55 MC: 5 BSCG 40 / 51 ASCG 12 / 38 MC: 2
Location: 1..879

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 292.0
  • Bit_score: 513
  • Evalue 2.40e-142
DNA-directed RNA polymerase subunit alpha n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PIU7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 292.0
  • Bit_score: 512
  • Evalue 2.90e-142
  • rbh
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 299.0
  • Bit_score: 431
  • Evalue 1.40e-118

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Taxonomy

Actinomyces sp. oral taxon 181 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 879
TTGCTGTCGTCCATTCCGGGCGCAGCGGTCACCTCGATCCGCATTGACGGTGTGCCACACGAATTCCACACGGTGGAAGGCGTGAAGGAAGACGTCGCTGAGATCATCCTGAACATCAAAGACATCGTTCTGTCCTCTGAAGAGGATGAGCCTGTCGTGATGTACCTGCGCAAGGCTGGCCCCGGTGAGGTCGTCGCAGGGGATATTACTCCTCCTGCAGGCGTGGAAATCCACAACCCTGACCTTCATCTGGCAACGCTCAATGAGAAGGGCAAGCTCGAGATTGAACTGACGGTTGAGCGTGGCCGTGGCTACGTTTCCGCTGCTCAGAACAAGGATCCGCAAGCTGAGATCTCCCGCATCCCGATCGATTCGATCTACTCGCCGGTGCTCAAAGTGACATACAAGGTGGAGGCCACCCGTGTCGAGCAACGCACCGACTTTGATCGTCTGATCATCGATGTGGAAACCAAGCCAGCTATCAGCCCGCGCGATGCTCTCGCATCAGCCGGAAGCACCCTGGTGGAGCTCTTCGGCCTCATGCGTGAACTGAACGAGGAAGCAGAAGGCATCGAAGTGGGCCCATCGACTACCGATGAGACCCTTGCGCAAGACCTGGCCTTGCCGATCGAAAGCCTGAACCTGCAGTCCCGTTCGTACAACGCGCTGCGTCGACGCGGCATTCTCACCGTGGGTGAACTCGTTGCCCACTCTGAGGCTGACCTGCTGGATATCCGCAACTTCGGAACCAAGTCCATCGAGGAGATCAAGGAAGCCTTGGCATCCTTGGGTATGACCCTCAAGGATGCAGTCATGCCTGAACGCGCCGGCGGAGAAGACGCCGGAAACGTTCAGTTCAGTGACGACCAGTCTTTCTGA
PROTEIN sequence
Length: 293
LLSSIPGAAVTSIRIDGVPHEFHTVEGVKEDVAEIILNIKDIVLSSEEDEPVVMYLRKAGPGEVVAGDITPPAGVEIHNPDLHLATLNEKGKLEIELTVERGRGYVSAAQNKDPQAEISRIPIDSIYSPVLKVTYKVEATRVEQRTDFDRLIIDVETKPAISPRDALASAGSTLVELFGLMRELNEEAEGIEVGPSTTDETLAQDLALPIESLNLQSRSYNALRRRGILTVGELVAHSEADLLDIRNFGTKSIEEIKEALASLGMTLKDAVMPERAGGEDAGNVQFSDDQSF*