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NECEvent2014_5_2_scaffold_5632_1

Organism: NECEvent2014_5_2_Actinomyces_60_7

partial RP 47 / 55 MC: 5 BSCG 40 / 51 ASCG 12 / 38 MC: 2
Location: comp(3..236)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D62258 related cluster n=1 Tax=unknown RepID=UPI0003D62258 similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 78.0
  • Bit_score: 108
  • Evalue 2.60e-21
TetR family transcriptional regulator {ECO:0000313|EMBL:ETI82799.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense D similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 78.0
  • Bit_score: 108
  • Evalue 3.60e-21
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 77.0
  • Bit_score: 69
  • Evalue 4.90e-10

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Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 234
ATGCGCGAAACCATCAGACGCATCGCAGAAGAAGAATTCATTGCGAACGGATACGACGGCACCACGACCCGTCATATCGCGGCTCGCGCCAACTGTGATCCGGCAATGGTGAACTATTATTTCGACTCCAAGCAGCGTCTGTTCCGTGAGTGCTTCGACCTACCCATCGATCCTGCCGGCCAGATCTGCGAAATCCTGGCTCCTGACTTGACCAACGCAGCGGAGCGTCTCATG
PROTEIN sequence
Length: 78
MRETIRRIAEEEFIANGYDGTTTRHIAARANCDPAMVNYYFDSKQRLFRECFDLPIDPAGQICEILAPDLTNAAERLM