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NECEvent2014_5_2_scaffold_5861_2

Organism: NECEvent2014_5_2_Actinomyces_60_7

partial RP 47 / 55 MC: 5 BSCG 40 / 51 ASCG 12 / 38 MC: 2
Location: comp(891..1178)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 88.0
  • Bit_score: 149
  • Evalue 2.30e-33
DNA-directed RNA polymerase subunit omega n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PFN0_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 88.0
  • Bit_score: 149
  • Evalue 1.60e-33
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 90.0
  • Bit_score: 122
  • Evalue 6.00e-26

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Taxonomy

Actinomyces sp. oral taxon 181 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATTTACATGAGAAGAGGTCCCATGTCCGGAATTGTTGCCCAGCCTGAAGGCATCACCAACCCGCCGATCGACGACCTTCTGAACCACGTCGACTCCAAGTATGCGCTGGTGATCTTCGCGGCAAAGCGCGCCCGGCAGATCAACACCTACCAGCTCCAACTCGAGCAGAACATGGTGCAGTTCGTCGGGCCCGTAGTGGAAAGTGACCCCGATGATAAACCGCTGTCAATCGCACTACGCGAAATCAATGAAGGCAAGCTGACGCTCGAATCTGCGCCTGAGGCCTAA
PROTEIN sequence
Length: 96
IYMRRGPMSGIVAQPEGITNPPIDDLLNHVDSKYALVIFAAKRARQINTYQLQLEQNMVQFVGPVVESDPDDKPLSIALREINEGKLTLESAPEA*