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NECEvent2014_5_2_scaffold_5920_1

Organism: NECEvent2014_5_2_Actinomyces_60_7

partial RP 47 / 55 MC: 5 BSCG 40 / 51 ASCG 12 / 38 MC: 2
Location: 2..1168

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 389.0
  • Bit_score: 695
  • Evalue 3.50e-197
DNA-directed RNA polymerase subunit beta' n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PHZ9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 389.0
  • Bit_score: 691
  • Evalue 4.60e-196
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 389.0
  • Bit_score: 619
  • Evalue 4.90e-175

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Taxonomy

Actinomyces sp. S6-Spd3 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
TACAAGCGCGTGCGCTACAAGGGCATCGTGTGTGAAAAGTGTGGCGTCGAAGTCACACGCTCGAAGGTGCGTCGCGAGCGCATGGGTCATATCGACCTGGCAGCGCCTGTCACGCACATCTGGTACTTCAAAGGCGTGCCCTCACGCCTCGGATACGTCCTGGACCTGGCTCCGAAGGACCTCGAAAAGGTTATCTACTTCGCTGCCTACATGATCACCGAGGTTGACGAAAAGGGTCGCGACGAGGACCTTGCCGACCTGCGCAGCGAGCTCGAAGTTGAAAAGGGCCACCTGGAGTCTCAGCGTGACGACGCGATCAACCAGCGCGCCGAAAAGCTGGAGCAGACCTTGGCACAAATGGAAGCCGATGGCGCCAAAGCTGCCGATCGCGACCGTGAACGCAAGGCAGGGGAACGCGAAATGGGGCAGATTCGCCGCCGTTTCGACCGCGACCTGGAACAGCTGGAGACCGTGTGGGAGCGTTTCCGCGACCTCAAGGTTGGTGACCTGGAAGGTGACGAGCGCCTGTACCGCGCCATGCAGCTGCGTTACGGCACGTACTTCAAGGGCGATATGGGTGCAGCCGCCATTCAGAAGCGTCTGCAGACCTTCGACCTGGATGCCGAAGTGGAGAACCTGCGCAACACGATCGCCAACGAGTCGGGCCCGCGCAAGACCCGGGCGATCAAGCGCCTGAAGGTCGTCAACGCCTTTGTGCAAACCGGTAACAAGCCGGAGTCGATGGTGCTGACCGCTATCCCCGTCATCCCGCCGGATCTGCGCCCGATGGTTCAGCTGGACGGTGGCCGCTTTGCGACCTCGGACCTGAACGATCTGTACCGTCGCGTCATCAACCGCAACACGCGCCTGAAGAGGCTGCTGGAGCTGGGTGCGCCCGAGATCATTGTCAACAACGAAAAGCGCATGCTGCAGGAGTCTGTGGACGCCCTGTTCGACAACGGCCGTCGTGGCCGCCCCGTGGCCGGTCCTGGTAACCGCCCGCTGAAGTCGATCTCTGACATGCTCAAGGGTAAGCAGGGTCGTTTCCGTCAAAACCTGCTCGGTAAGCGCGTGGACTACTCGGGCCGTTCGGTCATCGTGGTGGGCCCGCAGCTGAAACTGCACCAGTGCGGTCTGCCCAAGCAGATGGCTCTGGAACTGTTCAAG
PROTEIN sequence
Length: 389
YKRVRYKGIVCEKCGVEVTRSKVRRERMGHIDLAAPVTHIWYFKGVPSRLGYVLDLAPKDLEKVIYFAAYMITEVDEKGRDEDLADLRSELEVEKGHLESQRDDAINQRAEKLEQTLAQMEADGAKAADRDRERKAGEREMGQIRRRFDRDLEQLETVWERFRDLKVGDLEGDERLYRAMQLRYGTYFKGDMGAAAIQKRLQTFDLDAEVENLRNTIANESGPRKTRAIKRLKVVNAFVQTGNKPESMVLTAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNTRLKRLLELGAPEIIVNNEKRMLQESVDALFDNGRRGRPVAGPGNRPLKSISDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKQMALELFK