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NECEvent2014_5_2_scaffold_879_8

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: comp(2301..3590)

Top 3 Functional Annotations

Value Algorithm Source
GbcA n=112 Tax=Pseudomonas RepID=E3A571_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 429.0
  • Bit_score: 890
  • Evalue 7.50e-256
  • rbh
GbcA Glycine betaine demethylase subunit A similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 429.0
  • Bit_score: 890
  • Evalue 2.10e-256
GbcA {ECO:0000313|EMBL:AHW74160.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 429.0
  • Bit_score: 890
  • Evalue 1.10e-255

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1290
ATGGACGTCACTTCCACCCTGAGTCTCGGCGATCCCCTGGAACCGGCCCGCAAGGCCACCGCCGACATGCTGCGCAGCCGCGACCACAGCTTCTCGCTGCCGCAGCCCTTCTACTGCGACCAGCGCCTGTTCGAGATCGACATGCAGGAGATCTTCCACAAGGAATGGCTGATCGCCGGCATGACCTGCGAGATTCCCGCCAAGGGCAATTTCCTCACCCTGCAGATCGGTAAGAACCCGGTCCTGGTGATCCGTGGCGCCGAAGGCCAGGTGCATGCCTTTCACAATGTCTGCCGGCACCGCGGCTCGCGCCTGTGCGTGAGCGAGAAAGGCAAGGGGGCCAAGCTGGTCTGCCCCTACCACCAGTGGACCTACGAGCTGGATGGCCGCCTGCTGTTCGCCGGCACCGAGATGGGCGCCGACTTCGACATGAAGGAGTACGGCCTGAAGCCGATCCAGGTGAAGACCGCCGGCGGCTACATCTTCATCAGCCTGGCGGAGAACCCGCCGGCCATCGACGACTTCCTGGCGACGCTCGAGCACTACATGGAGCCGTACGACATGGAGAACGCCAAGGTGGCGGTGCAGACCACCATCCGCGAAGCCGCCAACTGGAAGCTGGTGATCGAGAACAACCGCGAGTGCTACCACTGCAACGGCTCCCACCCGGAACTGCTGAAGACCCTGCTGGAGTGGGACGACGTCACCGACCCGCGCGCCAGCCAGGCGTTCAAGGACCAGGTGGCGGCCTGCACCAGCGCCTGGGACGCCGAGAAGATCCCGTACGCCCATGCCAGCTTCGGCCTGCGCAATCGCATCGTGCGCATGCCGCTGCTGGACGGCACGGTGTCGATGACCATGGACGGCAAGCAAGGCAGCAAGAAGCTCATGGGCCGGATCAAGAACCCCGACCTCGGCTCGATGCGCATCCTGCACCTGCCGCACTCCTGGAACCACTGCATGGGCGACCACCTGATCGTCTTCACCGTGTGGCCGATCAGCGCCCAGGAAACCCTGGTCACCACCAAATGGCTGGTGCACAAGGACGCGGTGGAAGGCGTCGACTACGACGTGGCGCGCCTGCGCGAGGTATGGGACGCGACCAACGACCAGGATCGTCGGCTGGCCGAGGAGAACCAGCGCGGGATCAACTCCGACGCCTACCAGCCTGGTCCATACTCGAAGACCTACGAGTTCGGTGTGATCAATTTCCTCGACTGGTACAGCGAGCGCATGCTGAACAACCTCGGCGAGGAGTCCGCCCACGTGCGCAAGGTGGCCGGCAGCTGA
PROTEIN sequence
Length: 430
MDVTSTLSLGDPLEPARKATADMLRSRDHSFSLPQPFYCDQRLFEIDMQEIFHKEWLIAGMTCEIPAKGNFLTLQIGKNPVLVIRGAEGQVHAFHNVCRHRGSRLCVSEKGKGAKLVCPYHQWTYELDGRLLFAGTEMGADFDMKEYGLKPIQVKTAGGYIFISLAENPPAIDDFLATLEHYMEPYDMENAKVAVQTTIREAANWKLVIENNRECYHCNGSHPELLKTLLEWDDVTDPRASQAFKDQVAACTSAWDAEKIPYAHASFGLRNRIVRMPLLDGTVSMTMDGKQGSKKLMGRIKNPDLGSMRILHLPHSWNHCMGDHLIVFTVWPISAQETLVTTKWLVHKDAVEGVDYDVARLREVWDATNDQDRRLAEENQRGINSDAYQPGPYSKTYEFGVINFLDWYSERMLNNLGEESAHVRKVAGS*