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NECEvent2014_5_2_scaffold_2847_1

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: 2..475

Top 3 Functional Annotations

Value Algorithm Source
shikimate 5-dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 157.0
  • Bit_score: 307
  • Evalue 2.20e-81
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1415629 species="Bacteria; Prot similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 157.0
  • Bit_score: 307
  • Evalue 1.10e-80
Shikimate dehydrogenase n=19 Tax=Pseudomonas aeruginosa RepID=G2L270_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 157.0
  • Bit_score: 307
  • Evalue 7.70e-81
  • rbh

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
CGCCAGCGCGTGGTGCAGATGGGCGCGGGCGGCGCCGGCGCGGCAGTGGCCCATGCGCTGCTCGCCGAGGGCGTCGAGCGGCTGGTCCTGTTCGACGTCGACCCGGCGCGGGCCCAGGCCCTCGCGGACAACCTCAACCAGCACTTCGGCGCGCCACGAGCGCTCGCCGGCAGCGACCTGGCCGGCGCCCTGGGCGACGCCCAGGGATTGGTCAACACCACCCCGGTGGGCATGGCCAAGCTACCCGGCATGCCGGTGCCGGCGGAACTGTTGCGCGCCGACCTGTGGGTCGCCGAGGTGATCTACTTTCCGCTGGAAACCGAGCTGCTGCGCCAGGCCCGCGCCCTCGGCTGCCGCACACTGGACGGCGGCACCATGGCGGTGTTCCAGGCGGTGAAGGCATTCGAACTGTTCAGCGGGGTGGCGGCCGACGCCGCGCGCATGCAGGCGCACTTCGCCAGCCTGGGCGACTGA
PROTEIN sequence
Length: 158
RQRVVQMGAGGAGAAVAHALLAEGVERLVLFDVDPARAQALADNLNQHFGAPRALAGSDLAGALGDAQGLVNTTPVGMAKLPGMPVPAELLRADLWVAEVIYFPLETELLRQARALGCRTLDGGTMAVFQAVKAFELFSGVAADAARMQAHFASLGD*