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NECEvent2014_5_2_scaffold_2491_3

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: 1004..2221

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase beta subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 406.0
  • Bit_score: 800
  • Evalue 1.60e-229
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 406.0
  • Bit_score: 800
  • Evalue 8.00e-229
DNA-directed RNA polymerase, beta subunit/140 kD subunit n=1 Tax=Pseudomonas aeruginosa C3719 RepID=A3KZE1_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 406.0
  • Bit_score: 800
  • Evalue 5.70e-229
  • rbh

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1218
ATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCGTATTTGCTGGCCATCCAGCTGGATTCCTATCGCGAATTCCTGCAGGCTGGCGCAACCAAGGAGCAGTTCCGCGATATCGGTCTGCACGCGGCCTTCAAGTCCGTTTTCCCGATTATCAGCTATTCCGGCAATGCTGCCCTGGAATACGTCGGCTACCGTCTGGGTGAGCCGGCATTCGATGTCAAGGAGTGCGTGCTGCGCGGCGTGACCTTCGCCGTACCGCTGCGCGTGAAAGTTCGCCTGATCATCTTCGACCGCGAGTCGTCGAACAAGGCGATCAAGGACATCAAGGAACAAGAAGTCTACATGGGGGAAATCCCCCTGATGACCGAGAACGGTACCTTCATCATCAACGGTACCGAGCGTGTCATCGTCTCCCAGCTGCACCGTTCCCCGGGCGTGTTCTTCGACCACGACCGTGGCAAGACCCACAGCTCCGGCAAGCTGCTGTACTCCGCGCGGATCATTCCTTACCGCGGTTCCTGGCTGGACTTCGAGTTCGATCCGAAGGACTGCGTGTTCGTCCGTATCGACCGTCGCCGCAAGCTGCCGGCCTCGGTACTGCTGCGCGCGCTCGGCTACAGCACGGAAGAGATCCTCAACGCCTTCTACGCGACCAACGTCTTCCACATCAAGGGCGAGACCCTGAACCTGGAACTGGTCCCGCAGCGCCTGCGCGGTGAAGTCGCGAGCATCGACATCAAGGATGGCAGCGGCAAGGTGATCGTGGAGCAGGGGCGTCGTATCACTGCCCGCCACATCAACCAGCTGGAAAAGGCTGGCGTGAGCCAGCTGGAAGTGCCGTTCGACTACCTGATCGGCCGTACCATCGCCAAGGCGATCGTGCATCCGGCTACCGGCGAGATCATCGCCGAGTGCAACACCGAGCTGACCCTCGACCTCCTGGCCAAGGTGGCCAAGGCCCAGGTCGTGCGCATCGAGACCCTGTACACCAACGACATCGACTGCGGTCCGTTCATCTCCGACACCCTGAAGATCGACAACACCAGCAACCAGCTGGAAGCCCTGGTCGAGATCTACCGGATGATGCGTCCGGGCGAGCCGCCGACCAAGGAAGCTGCCGAGACCCTGTTCGGCAACCTGTTCTTCAGCGCCGAGCGTTACGACCTGTCGGCCGTAGGC
PROTEIN sequence
Length: 406
MAYSYTEKKRIRKDFSKLPDVMDVPYLLAIQLDSYREFLQAGATKEQFRDIGLHAAFKSVFPIISYSGNAALEYVGYRLGEPAFDVKECVLRGVTFAVPLRVKVRLIIFDRESSNKAIKDIKEQEVYMGEIPLMTENGTFIINGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLYSARIIPYRGSWLDFEFDPKDCVFVRIDRRRKLPASVLLRALGYSTEEILNAFYATNVFHIKGETLNLELVPQRLRGEVASIDIKDGSGKVIVEQGRRITARHINQLEKAGVSQLEVPFDYLIGRTIAKAIVHPATGEIIAECNTELTLDLLAKVAKAQVVRIETLYTNDIDCGPFISDTLKIDNTSNQLEALVEIYRMMRPGEPPTKEAAETLFGNLFFSAERYDLSAVG