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NECEvent2014_5_2_scaffold_3453_1

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: 1..528

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=64 Tax=Pseudomonas RepID=V5SWI3_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 175.0
  • Bit_score: 360
  • Evalue 8.50e-97
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 175.0
  • Bit_score: 360
  • Evalue 2.40e-97
LysR family transcriptional regulator {ECO:0000313|EMBL:ETD46336.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 175.0
  • Bit_score: 360
  • Evalue 1.20e-96

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
CTCCTGTCGAGTCCTTCGGACGGCCAGGACCTGCCGCTGGCCGATGTCGAGGTGCGCGGCGACAGCCATGGCGTGGCGGCCGGTGAGCGGCTGCTGGAGGAGCGCGTGCTACCGATGGCCGCGCCGGGGCTGCTGCTGGGCCTGCCGCGGCCCTGGACGCCAGCCATGCTCGCCGGCCTGCCGTTGCTGCGCTCGCCGCTGGAGCCCTGGCAGCCGTGGTTCCGCGTGGCCGGGCTGGACTGGCCGGAGCCCTGCGCCGGGCCGCGCCTGCTCGATTTGGGCATGACCCTGGAAGCCGCCGCCAACGGCCAGGGCGTGGCCCTCGCGCGACCCTCGCTGGCGCGCGCCTGGCTTGCCGAGGGGCGGCTGGTGGTGCTGTTCCCGCTGCGTTCGGCTCCCACCCACCATTACCACCTGCGCAGCCACCAGGCCTCGCCGGCCAGCCAGCGTTTCGCCGCCTGGCTGGCGGCGATCTGCCGCGAGGCGGTGGCCCAGGGCAGGGAATTCCTTCCGGCGGCGGACGACTGA
PROTEIN sequence
Length: 176
LLSSPSDGQDLPLADVEVRGDSHGVAAGERLLEERVLPMAAPGLLLGLPRPWTPAMLAGLPLLRSPLEPWQPWFRVAGLDWPEPCAGPRLLDLGMTLEAAANGQGVALARPSLARAWLAEGRLVVLFPLRSAPTHHYHLRSHQASPASQRFAAWLAAICREAVAQGREFLPAADD*