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NECEvent2014_5_2_scaffold_2126_2

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: 311..745

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion system regulator LcrR n=2 Tax=Pseudomonas aeruginosa RepID=U8REA2_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 144.0
  • Bit_score: 299
  • Evalue 1.50e-78
Low calcium response locus protein R similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 144.0
  • Bit_score: 296
  • Evalue 4.60e-78
Low calcium response locus protein R {ECO:0000313|EMBL:AKE70589.1}; PcrR {ECO:0000313|EMBL:AAC45945.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI77075.1}; Transcriptional reg similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 144.0
  • Bit_score: 296
  • Evalue 2.30e-77

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
GTGAGCGCCGATCCGCTGATTCCCTGGTTTCTCGCCCGCGGCCTGGCGGTGCGTCCGCATTGCCTGCGCGACACCTCGATCGCGCTCGGCTGGCAGGTCCTGGCCTATGGCTGCGAACTGGCCTGGCGCTGCGACGGCGAGCGGGTCTGGATCGTGATGTTGCGTCGGCGGCAGGCGCGCAGCGGATTGGCCAATCCATTCGCCGCGCTGTACCTGCTGGCGGAGGCCACGCTCGATACGCTGGGGCCGCGCCAGCGTCTCTACGGCAAGGTCCTGGCGCTGGCCGGCAGCCCACTGCCTGGCGAGCGCATGGCGCGCTTCTATCGCCGCTGGACCGGCGCCGCCGAGCCCGCCGACGGCTGGTTCGAGCTGGAGGCCGGGCGGGTGGTGACGCAGCGAAGCCTGCGAAAACGACAAAAACCCGACCGTGCCTGA
PROTEIN sequence
Length: 145
VSADPLIPWFLARGLAVRPHCLRDTSIALGWQVLAYGCELAWRCDGERVWIVMLRRRQARSGLANPFAALYLLAEATLDTLGPRQRLYGKVLALAGSPLPGERMARFYRRWTGAAEPADGWFELEAGRVVTQRSLRKRQKPDRA*