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NECEvent2014_5_2_scaffold_5266_1

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: comp(2..1282)

Top 3 Functional Annotations

Value Algorithm Source
Porin B n=4 Tax=Pseudomonas aeruginosa RepID=U8LYP7_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 411.0
  • Bit_score: 854
  • Evalue 5.90e-245
  • rbh
Glucose-selective porin OprB similarity KEGG
DB: KEGG
  • Identity: 98.5
  • Coverage: 411.0
  • Bit_score: 852
  • Evalue 4.90e-245
Porin B {ECO:0000313|EMBL:EZP05004.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 411.0
  • Bit_score: 852
  • Evalue 2.40e-244

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1281
AGAACCATTGACCTGGGTGTGCAGAAGGCCGGCAATGTCGACTTCACCTGGGACGGCAAAGACGCCGAGGGCGAGCTGCTGGAGAAGGGCTACGACTTCAAGCTGGAGTACGTCGGCGAGGCGGCGGCCAACCTCGACGGCGGCTATGACGACGACAAGACAGGACGCTACACCGACCAGTTCGCCCTGGGCGTGCACATGGACCTGGAGAAGATCCTCGGCTGGAAGGCTACCGAGTTCCAGTTCACCGTCACCGAGCGCAACGGCAAGAACCTTTCCAACGACCGCATCGGCGACCCGCGTGCCGGGCACATCAGCTCGGTGCAGGAGGTCTGGGGCCGCGGGCAGACCTGGCGGCTGACCCAGCTGTGGCTCAAGCAGCAGTACTTCGACGGCGCGCTGGACGTGAAATTCGGCCGTTTCGGCGAGGGCGAGGACTTCAACAGCTTCCCCTGCGATTTCCAGAACCTGGCCTTCTGCGGCTCGCAGGTGGGCAACTGGGCGGGGAGCATCTGGTACAACTGGCCGGTCAGCCAGTGGGCGTTGCGGGTGAAGTACAACTTCGCGCCGGACTGGTACGTGCAGGTCGGCGCCTACGAGCAGAACCCGTCGAACCTGAAGACCGGCAACGGCTTCAAGATGAGCGGCAGCGGGACCAAGGGCGCGCTGCTGCCGGTGGAGCTGATCTGGCAGCCGAAGGTCGGCGCCGAGCAACTGCCGGGCGAGTACCGGCTGGGTTACTACTACAGCACGGCGAAGGCCGATGACGTCTACGACGACGTCGACGGCCAGCCGCAGGGGCTGACCGGCAACGACTTCAAGTCGCGCGGCAGCAAGCATGGCTGGTGGGTGGTGGCGCAGCAGCAGGTCACTTCGCACAACGGCGATGCCTCGCGCGGGTTGAGCCTGTTCGCCAACCTGACGGTCCACGACAAGGCGACCAACGTGGTGGACAACTACCAGCAGCTCGGGGTGGTCTACAAGGGTCCGTTCGACGCGCGGCCGAAGGACGACATCGGCCTGGGCATCGCGCGCATCCATGTCAACGACGATGTGAAGAAGCGCCAGCGCCTGGTGAACCAGGTGAACGGCATCGACGACTACGACAACCCGCTGTACCAGCCGCTGCAGGACACCGAGTACAACGCCGAGCTGTACTACGGGGTGCATGTGACCGACTGGCTGACGGTGCGGCCGAACCTGCAATACATCAAGCAGCCGGGCGGGGTCGACGAGGTCGACAACGCGCTGGTGGCGGGGATCAAGATCCAGACGGTGTTC
PROTEIN sequence
Length: 427
RTIDLGVQKAGNVDFTWDGKDAEGELLEKGYDFKLEYVGEAAANLDGGYDDDKTGRYTDQFALGVHMDLEKILGWKATEFQFTVTERNGKNLSNDRIGDPRAGHISSVQEVWGRGQTWRLTQLWLKQQYFDGALDVKFGRFGEGEDFNSFPCDFQNLAFCGSQVGNWAGSIWYNWPVSQWALRVKYNFAPDWYVQVGAYEQNPSNLKTGNGFKMSGSGTKGALLPVELIWQPKVGAEQLPGEYRLGYYYSTAKADDVYDDVDGQPQGLTGNDFKSRGSKHGWWVVAQQQVTSHNGDASRGLSLFANLTVHDKATNVVDNYQQLGVVYKGPFDARPKDDIGLGIARIHVNDDVKKRQRLVNQVNGIDDYDNPLYQPLQDTEYNAELYYGVHVTDWLTVRPNLQYIKQPGGVDEVDNALVAGIKIQTVF