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NECEvent2014_5_2_scaffold_5451_1

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: 1..267

Top 3 Functional Annotations

Value Algorithm Source
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 180
  • Evalue 2.20e-43
L-carnitine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02129}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_02129};; Short=L-CDH {ECO:0000256|HAMAP-Rule:MF_02129};; EC=1.1.1.108 {ECO:0000256|HAMAP-Rule:MF_02129 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 180
  • Evalue 1.10e-42
L-carnitine dehydrogenase n=3 Tax=Pseudomonas aeruginosa RepID=M9SG51_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 180
  • Evalue 8.00e-43

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
TTCCTGACCTACACCCTGGCCGGTGGCAACGCCGGCATGCGCCACTTCATGGCGCAGTTCGGCCCGGCGCTGCAATTGCCCTGGACCTACCTGCCGGCGCCGGAACTCACCGAAGCCCTGATCGACCGGGTGGTGGAGGGCACCGCCGAGCAGCAGGGCGCACGCAGCATCGCCGAGCTCGAGCGCTACCGCGACGACTGCCTGCTGGCGGTGCTCGGGGCGATCAGGGAAACCAAGGCCCGGCACGGCTTCGCCTTCGCCGAGTGA
PROTEIN sequence
Length: 89
FLTYTLAGGNAGMRHFMAQFGPALQLPWTYLPAPELTEALIDRVVEGTAEQQGARSIAELERYRDDCLLAVLGAIRETKARHGFAFAE*