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NECEvent2014_5_2_scaffold_5479_2

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: comp(378..938)

Top 3 Functional Annotations

Value Algorithm Source
RoxR n=88 Tax=Pseudomonas RepID=Q9HVS8_PSEAE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 186.0
  • Bit_score: 365
  • Evalue 3.70e-98
  • rbh
Dna binding response regulator PrrA (RegA) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 186.0
  • Bit_score: 365
  • Evalue 1.00e-98
  • rbh
RoxR {ECO:0000313|EMBL:AHW73194.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 186.0
  • Bit_score: 365
  • Evalue 5.10e-98

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGTCTGAAGAGCTGCTCTTCGAAGGGGAAGAACAACCCCATCTCCTGCTGGTGGACGACGATCCCACCTTTACCCGGGTCCTGGCCCGGGCCATGAGCCGTCGCGGCCTGCGGGTCAGCACCGCCGGCTCCGCCGAGGAAGGCCTGGCGCTGGCCCAGCAGGACACGCCGGACTATGCCGTGCTCGACCTGAAGATGGAAGGCGACTCCGGCCTGGTGCTGCTGCCGAAGCTGCTGGAGCTGCACGCGGACATGCGGGTGGTGATCCTCACCGGCTATTCCAGCATCGCCACCGCGGTGGAGGCGATCAAGCGCGGCGCCTGCAACTACCTGTGCAAGCCGGCGGATGCCGATGACGTGTTGGCCGCGCTGCTCTCCGAGCACGCCGACCTGGACACCCTGGTGCCGGAAAACCCGATGTCGGTGGATCGCCTGCAATGGGAGCACATCCAGCGCGTGCTCGCCGAGCACGAGGGCAACATCTCCGCCACCGCCCGCGCCCTGGGCATGCATCGACGGACCTTGCAGCGCAAGCTGCAGAAGCGGCCGGTACGGCGCTGA
PROTEIN sequence
Length: 187
MSEELLFEGEEQPHLLLVDDDPTFTRVLARAMSRRGLRVSTAGSAEEGLALAQQDTPDYAVLDLKMEGDSGLVLLPKLLELHADMRVVILTGYSSIATAVEAIKRGACNYLCKPADADDVLAALLSEHADLDTLVPENPMSVDRLQWEHIQRVLAEHEGNISATARALGMHRRTLQRKLQKRPVRR*