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NECEvent2014_5_2_scaffold_4253_1

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: comp(3..221)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=18 Tax=Pseudomonas RepID=G4LC67_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 60.0
  • Bit_score: 96
  • Evalue 9.50e-18
type VI secretion protein similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 60.0
  • Bit_score: 96
  • Evalue 2.70e-18
Type VI secretion protein {ECO:0000313|EMBL:ETU84114.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aer similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 60.0
  • Bit_score: 96
  • Evalue 1.30e-17

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 219
ATGGCAGGCGAAGCCGGGCAGCCGTCCGAACCTCTGAACCTGCTCGCCGGGATGGCGGCGGCGCCCTGGGACTATGACTTCTTCCAGGCGCTGCGGCGCATCGAGTGCGAGTCGCCGCAACTGCCGCGCCTCCGCCCAGGCCCGGTAGAACAGGGTCAGAAGGCGGTGGTGGAAGACGTCCATGAAGCGCTTGAAGGTCGCGTCGTTGACGTTGCGCTG
PROTEIN sequence
Length: 73
MAGEAGQPSEPLNLLAGMAAAPWDYDFFQALRRIECESPQLPRLRPGPVEQGQKAVVEDVHEALEGRVVDVAL