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NECEvent2014_5_2_scaffold_4086_1

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: comp(2..286)

Top 3 Functional Annotations

Value Algorithm Source
Large-conductance mechanosensitive channel n=82 Tax=Pseudomonas RepID=MSCL_PSEA8 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 95.0
  • Bit_score: 183
  • Evalue 1.30e-43
mscL; large-conductance mechanosensitive channel similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 95.0
  • Bit_score: 183
  • Evalue 3.70e-44
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseu similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 95.0
  • Bit_score: 183
  • Evalue 1.80e-43

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGGGTCTTCTGAGTGAATTCAAAGCCTTTGCCGTCAAGGGCAATGTCGTGGATATGGCTGTCGGTATCATCATCGGCGCGGCCTTCGGCAAGATCGTCTCGTCCTTCGTGGGCGATGTGATCATGCCGCCGATCGGACTGCTGATCGGCGGAGTCGACTTCTCCGACCTGGCGATAACGTTGAAGGCCGCCGAAGGCGACGTGCCGGCGGTGGTGCTGGCCTATGGCAAGTTCATTCAGACCGTACTCGACTTCGTCATCGTGGCCTTCGCCATCTTCATGGGG
PROTEIN sequence
Length: 95
MGLLSEFKAFAVKGNVVDMAVGIIIGAAFGKIVSSFVGDVIMPPIGLLIGGVDFSDLAITLKAAEGDVPAVVLAYGKFIQTVLDFVIVAFAIFMG