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NECEvent2014_5_2_scaffold_4907_1

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: comp(3..362)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadacea similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 120.0
  • Bit_score: 240
  • Evalue 9.40e-61
Ribosomal large subunit pseudouridine synthase D n=2 Tax=Pseudomonas aeruginosa RepID=U8FH38_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 120.0
  • Bit_score: 240
  • Evalue 6.70e-61
rluD; 23S rRNA pseudouridine synthase D similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 120.0
  • Bit_score: 240
  • Evalue 1.90e-61

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGTCCGATATGATTCAACGCGCGGCCGAGGTGCCGTTCGAGCTGGGTGGCCAGCGTCTCGACCAGATCGCCGCCCAGCTTTTTCCCGAACACTCCCGCTCCCGTCTGGCCGGCTGGATCAAGGACGGACGCCTGACCGTCGACGGCGCCGTGCTGCGCCCGCGCGACATCGTCCACAGCGGTGCGCAACTGGTCCTGGAGGCCGAGCAGGAAGCCCAGGGCGAGTGGCTCGCACAGGACATCGAGCTGGAAATCGTCTACGAGGACGAGCACATCCTGGTGATCGACAAGCCCGCCGGCCTGGTGGTCCATCCGGCTGCCGGCCATCAGGACGGCACCCTGCTGAATGCCTTGCTCTAC
PROTEIN sequence
Length: 120
MSDMIQRAAEVPFELGGQRLDQIAAQLFPEHSRSRLAGWIKDGRLTVDGAVLRPRDIVHSGAQLVLEAEQEAQGEWLAQDIELEIVYEDEHILVIDKPAGLVVHPAAGHQDGTLLNALLY