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NECEvent2014_5_2_scaffold_4952_2

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: comp(579..1166)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family protein n=51 Tax=Pseudomonas aeruginosa RepID=T2E732_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 195.0
  • Bit_score: 392
  • Evalue 2.90e-106
  • rbh
sigma-70 factor, ECF subfamily protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 195.0
  • Bit_score: 392
  • Evalue 8.30e-107
Uncharacterized protein {ECO:0000313|EMBL:CEH97791.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 195.0
  • Bit_score: 392
  • Evalue 4.10e-106

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGCCCGACCGCGACCTACCTCCCGGCCCGCGCCCGGATGCCTTGCCGGCAGACGGCGAGGCGGCGCGCCGCGCGGATCTGCTCAAGGCCTTCCTGGCCCAGCGCCAGCGCATGGAAAGCCTGGTCAGCCGCTGGGTCGGCTGCCGGGCGACCGCCGCCGACCTGGTCCAGGAACTGTTCCTGCGCTTCTGGCGGCGCCCGGCCGCCCCGGTGGAGGAGCTTGGCAGCTACCTCCTGCGCAGCGCGCGCAACCTGGCCATCGACCACTTGCGTGGCGAAGGATCGCGGCAACGGCAACTGGACGACTGGCTGCCGGAGCAGCGCCAGGGCGAGCCGGTCGGTCCCGAGCAGGCGCTCGAGGCCGGCGACCAGTGGCGCCGGGTCGAGGCCGCCTTGCGCGGCCTGCCCGAGCGGACCCGGCGGATTTTCCTGCTCAATCGCATCCACGGCCGCACCTACGCGGAGATCGCCCAGGCCATGCAGCTTTCCCAAAGCGCCGTGGAAAAACATATGATGCGCGCCCTCGACGCCTGCAAGGCGAGCCTGGCCGGCCCGGCCGGCGAGCAGGCAAGGAGCGCCCAGCCATGA
PROTEIN sequence
Length: 196
MPDRDLPPGPRPDALPADGEAARRADLLKAFLAQRQRMESLVSRWVGCRATAADLVQELFLRFWRRPAAPVEELGSYLLRSARNLAIDHLRGEGSRQRQLDDWLPEQRQGEPVGPEQALEAGDQWRRVEAALRGLPERTRRIFLLNRIHGRTYAEIAQAMQLSQSAVEKHMMRALDACKASLAGPAGEQARSAQP*