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NECEvent2014_5_2_scaffold_5232_2

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: 748..1287

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=2 Tax=Rhizobium radiobacter RepID=G6XR58_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 63.0
  • Bit_score: 64
  • Evalue 9.90e-08
atxR; transcriptional regulator, LuxR family similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 63.0
  • Bit_score: 64
  • Evalue 4.70e-08
LuxR family transcriptional regulator {ECO:0000313|EMBL:KDR89013.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agr similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 63.0
  • Bit_score: 64
  • Evalue 1.40e-07

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGGAAAAGATAGAAACAAGAATAGGTGAAGCTCTAGAAGAAACCACCAGAATAATAAAAAACCACTTAAAAGGACCATTCCCAGTATTCCACGAAATATCAATAAGACATCCCATCCCACTGAGTCCAGAGAGAATATACACATCCAAAACAGGAAGCGACCAAAAACAAGGAGCAACATTCAGACTAACGCTAACACCACAAAATCTATACAAAACAACAATAACAACAAAATACAAAGACACCAAAGTAGACCATACCCATGCAAAAATCTACACATATGCTTTATTTGGAATTCTCATAAGTAATACCAAGAAAAGGACCCCAAACTTATTCATAACCCCAGACACCAAGCTAACCAAAAGAGAGCTCGAGATATTACGTAGATCAGCAGATGGACAAACGGCGCTATCGATATCTGAGAAACTAAGTTTATCCCCACACACAGTTAACTCTCATATTAACAGCGCCACTAGAAAGCTTAGATGCAGGAACAAACCTCAAGCCATTGCTTTAGCTGCAATTCTCGAACTCCTCTGA
PROTEIN sequence
Length: 180
MEKIETRIGEALEETTRIIKNHLKGPFPVFHEISIRHPIPLSPERIYTSKTGSDQKQGATFRLTLTPQNLYKTTITTKYKDTKVDHTHAKIYTYALFGILISNTKKRTPNLFITPDTKLTKRELEILRRSADGQTALSISEKLSLSPHTVNSHINSATRKLRCRNKPQAIALAAILELL*