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NECEvent2014_5_2_scaffold_6476_1

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: comp(2..199)

Top 3 Functional Annotations

Value Algorithm Source
Protein TolB n=122 Tax=Pseudomonas RepID=B7UXW0_PSEA8 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 66.0
  • Bit_score: 129
  • Evalue 1.20e-27
tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins similarity KEGG
DB: KEGG
  • Identity: 98.5
  • Coverage: 66.0
  • Bit_score: 128
  • Evalue 9.80e-28
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 66.0
  • Bit_score: 128
  • Evalue 4.90e-27

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 198
GTGAGTACCCTGATTCGCATTGCGCTGTTCGCCCTGGCCCTGGTGGCAGGTGCTGCGCAGGCTGCCGACCCGCTGGTGATCTCCAGCGGTAACGACCGTGCCATTCCCATCGCCGTGGTGCCGTTCGGCTTCCAGGGGGGCAACGTGTTGCCGGAAGACATGTCCAATATCATCGGCAACGACCTGCGCAACTCCGGC
PROTEIN sequence
Length: 66
VSTLIRIALFALALVAGAAQAADPLVISSGNDRAIPIAVVPFGFQGGNVLPEDMSNIIGNDLRNSG