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NECEvent2014_5_2_scaffold_5888_1

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: comp(1..1173)

Top 3 Functional Annotations

Value Algorithm Source
Conjugative coupling factor TraD, PFGI-1 class n=1 Tax=Pseudomonas aeruginosa BL12 RepID=U9IPB4_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 391.0
  • Bit_score: 773
  • Evalue 9.30e-221
Conjugative coupling factor TraD, PFGI-1 class {ECO:0000313|EMBL:ERV82992.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 391.0
  • Bit_score: 773
  • Evalue 1.30e-220
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 391.0
  • Bit_score: 770
  • Evalue 2.90e-220

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1173
GCGGCGTTCCGCGAGTTCGCATGGCGCTTCGTGAACATCATCGCCCGCGCCCTGGTGGAACTGGGGCAGCGCCCGGACTACATGCTGATCCAGCGCCACGTCATCAACATCGACGCGCTGTTCATTGAGTACGCCCAGCACTACTTTGCCAAGACGGAGCCCAAGGCCTGGGAGGTGATCGTCCAGATCGAGGCCAAGCTCAACGAGAAGAACATCCCAAGGAACATGATCGGGCGCGAGAAGCGTGTGGTGGCGCTGGAGCAATACCTCTCCCAGGCGCGCAACTACGACCCTGTGCTCGATGGCCTGCGCTCGGCGGTGCGCTACGACAAGACCTACTTCGACAAGATCGTTGCATCGCTGCTGCCGCTGCTGGAAAAGCTCACGAGCGGCAAGATCGCCCATCTCCTGGCGCCGAACTACTCCGACCTGGCCGACCCGCGCCCGATCTTCGACTGGATGCAGGTCATCCGAAAGCGGGCCATCGTCTATGTGGGTCTGGATGCGTTGTCTGACGCCGAGGTCGCCGCAGCGGTCGGCAATTCGATGTTCTCTGACCTGGTTTCGGTGGCCGGACACATCTACAAGCACGGAATCGACGATGGCCTGCCGGGCGCATCGGCTGGTGCGCGCGTGCCGATCAACGTGCATGCGGACGAGTTCAATGAATTGATGGGTGACGAGTTCATTCCGCTCATCAACAAGGGCGGTGGCGCGGGCCTACAAGTCACCGCCTACACGCAAACGCTTTCGGACATCGAGGCCCGCATCGGAAATCGCGCGAAGGCCGGCCAAGTGATCGGGAATTTCAACAATTTATTCATGTTGCGCGTGCGCGAGACGGCCACCGCGGAACTGCTGACGAGGCAGTTGCCGAAGGTCGAGGTCTATACGACCACCATCGTCTCGGGCGCGACGGACAGCTCAGACATCCGCGGCGCGACGGACTTCACGTCGAACACCCAGGACCGCATCAGCATGTCCAGCGTGCCGATGATCGAGCCGTCACACGTCGTCGGTCTGCCCAAGGGCCAGTGCTTCGCGCTGCTGCAGGGCGGCCAGCTTTGGAAGGTACGCATGCCGCTGCCGGCGCCGGACCCGGATGAAGTGATGCCGGCGGACCTGCAGCAACTGGCCGGGTACATGCGCCAGAGCTACAGCGAGGCCACGCAG
PROTEIN sequence
Length: 391
AAFREFAWRFVNIIARALVELGQRPDYMLIQRHVINIDALFIEYAQHYFAKTEPKAWEVIVQIEAKLNEKNIPRNMIGREKRVVALEQYLSQARNYDPVLDGLRSAVRYDKTYFDKIVASLLPLLEKLTSGKIAHLLAPNYSDLADPRPIFDWMQVIRKRAIVYVGLDALSDAEVAAAVGNSMFSDLVSVAGHIYKHGIDDGLPGASAGARVPINVHADEFNELMGDEFIPLINKGGGAGLQVTAYTQTLSDIEARIGNRAKAGQVIGNFNNLFMLRVRETATAELLTRQLPKVEVYTTTIVSGATDSSDIRGATDFTSNTQDRISMSSVPMIEPSHVVGLPKGQCFALLQGGQLWKVRMPLPAPDPDEVMPADLQQLAGYMRQSYSEATQ