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NECEvent2014_5_2_scaffold_6193_4

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: 841..1128

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator prtR n=1 Tax=Pseudomonas sp. P179 RepID=N2CS63_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 96.0
  • Bit_score: 186
  • Evalue 1.20e-44
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 96.0
  • Bit_score: 186
  • Evalue 3.40e-45
Transcriptional regulator {ECO:0000313|EMBL:BAQ37389.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugin similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 96.0
  • Bit_score: 186
  • Evalue 1.70e-44

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGGACAAGAGCACCCAGATCCCGCCCGACAGCTTCGCCGCTCGCCTCAAGCAGGCCATGGCGATGCGCAACCTGAAGCAGGAAACCCTCGCCGAAGCGGCAGGGGTTTCGCAGAACACCATTCACAAGCTGACCTCGGGCAAGGCCCAGAGCACCCGCAAGCTGATCGAGATCGCGGCGGCCCTGGGCGTCTCGCCGGTCTGGCTGCAGACCGGCGAAGGCGCTCCAGCCGCGCGCAGTGCCGTGTCCGTGGCCGATGGCAGCCCATTGGTGCTGGAACCGCTGCAT
PROTEIN sequence
Length: 96
MDKSTQIPPDSFAARLKQAMAMRNLKQETLAEAAGVSQNTIHKLTSGKAQSTRKLIEIAAALGVSPVWLQTGEGAPAARSAVSVADGSPLVLEPLH