ggKbase home page

NECEvent2014_5_2_scaffold_9_90

Organism: NECEvent2014_5_2_Clostridium_paraputrificum-rel_30_55

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(85731..87038)

Top 3 Functional Annotations

Value Algorithm Source
UPI0002DABD09 related cluster n=1 Tax=unknown RepID=UPI0002DABD09 similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 435.0
  • Bit_score: 585
  • Evalue 5.30e-164
  • rbh
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 429.0
  • Bit_score: 475
  • Evalue 1.10e-130
PTS cellbiose transporter subunit IIC similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 430.0
  • Bit_score: 377
  • Evalue 6.10e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Coprobacillus sp. 8_2_54BFAA → Coprobacillus → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1308
ATGGAAAAGTTTACGTCTTTGATTGAAAAGTTTTTAATGCCATTAGCATCAAAATTATCTAGTAACAAATACTTAAAAGCAATTAGCAACGGATTTGGAATATTATTACCTGTGATTATGGTAGGTGCTATATTTACATTATTAGCCAACTTACAAATTGGTCCATATCAAAGTTTTGTACAAGCTACTCATTTAAAAGAAATTTTCTCATTTGCTCCAGCAGTAACAACAGATTTATTAGCAATATACGCAGTATTTTTAATAGCAAAAGCTCTTTCAGAGAACTTTGAGTTAGAAGAAAAGGATTGTACAATATCTGCAATTATAGCTTTATTATCATTTTTAATTTTAATACCTATGGGTGTTATGGGAACAGAAGGAGAAGTTACTGTAACAATAGCTGCAGCTATTGGAACTAAGTGGTTAGGTGCAGCTGGTTTATTCTCAGCTATGGTGGTAGGGTTGATTGTACCAACAATTTATAAGTTTATAAAGGATAAAAATATCGGAATTAAAATGCCAGATAGTGTTCCGCCAACTATTTCAAAATCATTTTCGGCCTTGTTACCAGCTTTTATAATAGCTTTTTTATTCTGTATAGTTAGATATTTATTTACCTTAACTACTTATGGAAGTGCAAATCAATTTATATATTCAATGTTACAAAAACCACTAACAGGGTTAGGAGCTAGTCCATTTACATTTGTATTGTTTATAATTCTTTGTTCACTATTATGGTTCTTTGGATTACATGGTGGAATGATTGTAATGCCATTCTTAACAATGTTATATGCTAGTGCAGGACTTGAAAATTTACAAGCATACGCAGCAGGAACAGAAATGCCAAACGTAATAACTAAAGCTTGGTGGCCAGCTTATGCTTCCTTAGGTGGCGCAGGAGGTACACTTGGATTATGTATTATAATGGTCTTATTTGCTAAAAGTAAACGTTATAAAGCCCTTGGTGGTTTGGCATTACCTTCAGGATTATGTGGAATTAATGAACCAATAACTTTTGGTTTACCAGTTGTATTAAACACAATTATAATTATTCCAGTTATCTTGGCACCAGTAATTACTTTTGGAATAGCTTATTTTGTAACTAATATAGGTTTTGTTCCAATACTAAATGGCGCAGAAATTCCTCTTGGAACACCAGTAATTTTCTCGGGGTGGATGACTGGAGGATTAAGAGCAGCAATATTACAAGTTATTTTAGTAATTGTACAAATGTTAATATACTTCCCATTCTTTAAAGTGTTAGATAATCAAGCTGTAAAAGAAGAGATGGAAGAAGTAGTAGAATAA
PROTEIN sequence
Length: 436
MEKFTSLIEKFLMPLASKLSSNKYLKAISNGFGILLPVIMVGAIFTLLANLQIGPYQSFVQATHLKEIFSFAPAVTTDLLAIYAVFLIAKALSENFELEEKDCTISAIIALLSFLILIPMGVMGTEGEVTVTIAAAIGTKWLGAAGLFSAMVVGLIVPTIYKFIKDKNIGIKMPDSVPPTISKSFSALLPAFIIAFLFCIVRYLFTLTTYGSANQFIYSMLQKPLTGLGASPFTFVLFIILCSLLWFFGLHGGMIVMPFLTMLYASAGLENLQAYAAGTEMPNVITKAWWPAYASLGGAGGTLGLCIIMVLFAKSKRYKALGGLALPSGLCGINEPITFGLPVVLNTIIIIPVILAPVITFGIAYFVTNIGFVPILNGAEIPLGTPVIFSGWMTGGLRAAILQVILVIVQMLIYFPFFKVLDNQAVKEEMEEVVE*