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NECEvent2014_5_2_scaffold_36_6

Organism: NECEvent2014_5_2_Clostridium_paraputrificum-rel_30_55

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: 5631..6437

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000 similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 268.0
  • Bit_score: 324
  • Evalue 1.40e-85
Shikimate dehydrogenase n=12 Tax=Clostridium difficile RepID=C9XT73_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 268.0
  • Bit_score: 324
  • Evalue 1.00e-85
  • rbh
aroE; shikimate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 268.0
  • Bit_score: 324
  • Evalue 2.90e-86

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 807
ATGGAGTTTTATGGTTTATTAGGAGAAAAGCTATCTCATAGTTTATCACCACAAATTCATAATAGAATATTTGATTTAATAGGAATTGAAGGGGCTTATAAACTATTCCCTATACCTAAGGATAAGGTGAAGAAGGTTGGAGAGAGTATAAAGATATTTGGAATAAGGGGTATGAATGTAACAATTCCTTATAAAAAAGAAATTATGGATCAGCTAGATTTTATATCGGATGAATCTAGAAAGATTGGGGCAGTAAATACTATAAGTTTGGAGAATGGAAAACTTTATGGTTATAATACAGATTATTATGGATTTGGCCTTATGCTAGATATTAGTAAAATTGAAGTTAAAGATAAAAGAGCAGTAGTACTAGGAACAGGTGGAGCTGCAAAAGCAGTTGTTACGTATCTTCAAGACAAAGGAGTAAAGGAACTATTTGTAGTAAGTAGAAATAAGATGAAGAATAATTGGAGTGGTGAAGTTAATCTAATAGATTATTCTGACTTACAGAGTTTAGAAGGTGACTTACTTATTAACACAACTCCAGTTGGTATGTATCCTAATGTAGGAAAATCTCCTGTGGGTGAAAATGTTATAAAAAGATTTGAAGCTATAGTTGATTTAATATATAACCCAAGAGAGACAGAATTGTTGAGGCTAGCTAAATTAAATGGTAAAAAAAGTTGTGATGGATTATATATGTTAGTAGGTCAAGCAGTGAAGGCACAAGAAATATGGCAAGACATGAATATAGATAATAAGGTAACAAATATTATTTATGAAGAACTTAATGGTGAATTCAACTAG
PROTEIN sequence
Length: 269
MEFYGLLGEKLSHSLSPQIHNRIFDLIGIEGAYKLFPIPKDKVKKVGESIKIFGIRGMNVTIPYKKEIMDQLDFISDESRKIGAVNTISLENGKLYGYNTDYYGFGLMLDISKIEVKDKRAVVLGTGGAAKAVVTYLQDKGVKELFVVSRNKMKNNWSGEVNLIDYSDLQSLEGDLLINTTPVGMYPNVGKSPVGENVIKRFEAIVDLIYNPRETELLRLAKLNGKKSCDGLYMLVGQAVKAQEIWQDMNIDNKVTNIIYEELNGEFN*