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NECEvent2014_5_3_scaffold_4293_2

Organism: NECEvent2014_5_3_Campylobacter_ureolyticus_rel_29_5_partial

partial RP 37 / 55 MC: 1 BSCG 30 / 51 ASCG 6 / 38 MC: 1
Location: comp(550..1323)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000 similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 257.0
  • Bit_score: 483
  • Evalue 1.80e-133
aroE; shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 261.0
  • Bit_score: 309
  • Evalue 1.20e-81
  • rbh
Shikimate dehydrogenase n=1 Tax=Campylobacter ureolyticus ACS-301-V-Sch3b RepID=S3XIK4_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 257.0
  • Bit_score: 483
  • Evalue 1.30e-133
  • rbh

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Taxonomy

Campylobacter ureolyticus → Campylobacter → Campylobacterales → Epsilonproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGAAAAAATTTGCAGTCTTTGGCGATCCAATCTCTCATTCAATATCGCCAAGACTTCACAATCTCGCTATAAAAGAGCTAAGTTTAGATGCCTTTTATGGTAGAGTTTGTTTAAAAGATGGTAGCTTTTTGAAGGAAACTTTTTTAAATTTAGACTTAAGCGGTGCAAACATAACAATTCCATATAAACAAATAGCGTTTCAAATTTGTGATGAAATAGATCCTTATGCAAAAAAAATAGGCTCTTTAAATACAATAGTTAAAAATAAAGATAAGCTTTTTGGTTACAACACAGATGCACCTGGTTTTTTAAAAGCTATAAGTGAATTTAAAGACATAAAATCAGCTTTAATAATTGGTGCAGGAGGCACGACAAAAGCCTTGGCAAATGCTTTATCAAATTTAGATTTAGAAATAGTAAATAGAAGCGATAAATCTTTAGACTTTAAAGAATTTAATTTTTTTACTTATGAAAATTTCAAACCAAAAAAATTTGATTTGGTGATTAACTCAACCTCGGCTGGATTAAAAGATGATACTTTGCCACTTCCAGAAGAAATTTTAAAAGATTGCTTTTCTAAATATGCTTTTGATGTTATATATGGTAGAAAAACACCTTTTTTAAACTTGGCTAGTAATTTAAATGTAAAATATAAAGATGGGCTTGATATGCTTATTTATCAAGCAGTTTTGGCACTAAATTTATTTTTTAATAATAAGCTTGATGAGAAAAAAATAGAACTTTATATGAGAAAGGCTGCAAATCTAAATTAA
PROTEIN sequence
Length: 258
MKKFAVFGDPISHSISPRLHNLAIKELSLDAFYGRVCLKDGSFLKETFLNLDLSGANITIPYKQIAFQICDEIDPYAKKIGSLNTIVKNKDKLFGYNTDAPGFLKAISEFKDIKSALIIGAGGTTKALANALSNLDLEIVNRSDKSLDFKEFNFFTYENFKPKKFDLVINSTSAGLKDDTLPLPEEILKDCFSKYAFDVIYGRKTPFLNLASNLNVKYKDGLDMLIYQAVLALNLFFNNKLDEKKIELYMRKAANLN*