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NECEvent2014_5_3_scaffold_4593_3

Organism: NECEvent2014_5_3_Campylobacter_ureolyticus_rel_29_5_partial

partial RP 37 / 55 MC: 1 BSCG 30 / 51 ASCG 6 / 38 MC: 1
Location: comp(958..1242)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=883165 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 94.0
  • Bit_score: 182
  • Evalue 3.10e-43
transcription termination factor Rho n=1 Tax=Campylobacter ureolyticus RepID=UPI000363DCB4 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 94.0
  • Bit_score: 184
  • Evalue 4.50e-44
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 94.0
  • Bit_score: 162
  • Evalue 5.10e-38

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Taxonomy

Campylobacter ureolyticus → Campylobacter → Campylobacterales → Epsilonproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
TCAAAAATGGATGAGGTTATATTTGAAGAGTTTAAGGGAACTGGAAATAGTGAAATTCTCCTTGATAGAAATATAAGCGAAAGAAGAATTTACCCAGCAATTAATATCCTAAAATCAAGCACTAGAAAAGAAGAGCTTTTGCAAACTCCTGATATGCTTCAAAAAGTTTGGGCTTTGCGTTCAGCAATTGGAACAATGGATGATGTAGAAGCGCTTAAATTTCTATATTCAAAAATGCTTACAACTAAAAACAATGAAGAACTTTTATCTATAATGAATGAGTAA
PROTEIN sequence
Length: 95
SKMDEVIFEEFKGTGNSEILLDRNISERRIYPAINILKSSTRKEELLQTPDMLQKVWALRSAIGTMDDVEALKFLYSKMLTTKNNEELLSIMNE*