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NECEvent2014_5_3_scaffold_293_8

Organism: NECEvent2014_5_3_Staphylococcus_epidermidis_32_10

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 ASCG 12 / 38
Location: comp(5461..6285)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal large subunit pseudouridine synthase, RluD subfamily n=45 Tax=Staphylococcus epidermidis RepID=Q5HN86_STAEQ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 274.0
  • Bit_score: 554
  • Evalue 8.20e-155
  • rbh
Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YhcT type similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 274.0
  • Bit_score: 554
  • Evalue 2.30e-155
Ribosomal large subunit pseudouridine synthase, RluD subfamily {ECO:0000313|EMBL:AAW54714.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 274.0
  • Bit_score: 554
  • Evalue 1.10e-154

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Taxonomy

Staphylococcus epidermidis → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 825
ATGAAATTTACAATACCTAAACAATTTAACGATTATACATTGAGAGAGATTTTCCAATATTTAAAATTACCTAAAAAAGACTTACATCAACTGAATATGTCTAAAGAAATTTTAATTAATAAAGAGTACGGTACATTATTAAATAATGTTAAAACTGGTGATCATGTTGAGATACCAACCCCTAATGAAGTAAGTAATTATTTACCAAGTTATCGATATGCTCAAATTTATTACGAGGATGATGACTTGGCCATTGTCATGAAACCAAAAGGTGTTAAAACGCATCCCAATGATTTAAAAGAGAGCAACACACTTATGAACCATGTGATTTACACTGTTGATAGTGAATATGTTGAGCCCATACATCGACTAGATCAAGAAACAGTAGGTTTATTGATAGTTGCTAAAAATCCGCTTATGAAAAAAATCTTAGACCGAATGTTAGAATATAATGAAATTACGCGTATATATAAAGCAAATGTCAAAGCGTTGTTACCTATTAAGCCACAAACGATAGATATGCCTATTGGTAAAGATAAATTTCATTCAAACAAACGAAGAATTTCCAACACAGGTCAACGTGCAATCACTCACATTATTAACTCTAAAATGATTAAAGAAGGTGTATGTCAACTCGACATTAAACTAGATACAGGTCGAACACACCAAATTCGTGTGCACCTTGCTGAGATTGGCCATCCAGTTATTGGGGATCCACTTTATGGAACTTCAACATTACGACAATTAGAGCTAAATAGTCATCAAATTGAATTTACTCATCCACTGACTCAAGAAATTATTTCTGTAAGTCTAGATGATAAATAG
PROTEIN sequence
Length: 275
MKFTIPKQFNDYTLREIFQYLKLPKKDLHQLNMSKEILINKEYGTLLNNVKTGDHVEIPTPNEVSNYLPSYRYAQIYYEDDDLAIVMKPKGVKTHPNDLKESNTLMNHVIYTVDSEYVEPIHRLDQETVGLLIVAKNPLMKKILDRMLEYNEITRIYKANVKALLPIKPQTIDMPIGKDKFHSNKRRISNTGQRAITHIINSKMIKEGVCQLDIKLDTGRTHQIRVHLAEIGHPVIGDPLYGTSTLRQLELNSHQIEFTHPLTQEIISVSLDDK*