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NECEvent2014_5_3_scaffold_707_3

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: 2098..2952

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase {ECO:0000313|EMBL:AKE66875.1}; EC=1.1.1.25 {ECO:0000313|EMBL:AKE66875.1};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 284.0
  • Bit_score: 555
  • Evalue 3.10e-155
Shikimate dehydrogenase n=19 Tax=Pseudomonas aeruginosa RepID=G2L270_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 284.0
  • Bit_score: 555
  • Evalue 2.20e-155
  • rbh
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 284.0
  • Bit_score: 555
  • Evalue 6.30e-156
  • rbh

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGAGCGCGCCGCGATCGGTTCTCGCCGGCCTGATCGGTGCCGGCATCCAGGCGTCGCGGACCCCTGCCCTGCACGAGCGCGAGGGCGACGCCCAAGGCATCCGCTATCTGTACCGGCTGATCGATCTCGACCCGCTGGGCAAGTCGGCGGACGACCTGGAGTTCCTGCTCGCCGCCGCCAGCGACCTCGGCTTCACCGGGCTGAACGTCACCTTCCCCTGCAAGCAGGCGATCATCCCCCTGCTCGACGACCTCTCCGCCGAGGCACGCGGCATCGGCGCGGTGAACACCGTGGTGCTGCGCGATGGCCGGCGCATCGGCCACAACACCGACTGCCTGGGCTTCGCCGAGGGCTTTCGGCGCGGCCTGGCCGACGCGCCGCGCCAGCGCGTGGTGCAGATGGGCGCGGGCGGCGCCGGCGCGGCAGTGGCCCATGCGCTGCTCGCCGAGGGCGTCGAGCGGCTGGTCCTGTTCGACGTCGACCCGGCGCGGGCCCAGGCCCTCGCGGACAACCTCAACCAGCACTTCGGCGCGCCACGAGCGCTCGCCGGCAGCGACCTGGCCGGCGCCCTGGGCGACGCCCAGGGATTGGTCAACACCACCCCGGTGGGCATGGCCAAGCTACCCGGCATGCCGGTGCCGGCGGAACTGTTGCGCGCCGACCTGTGGGTCGCCGAGGTGATCTACTTTCCGCTGGAAACCGAGCTGCTGCGCCAGGCCCGCGCCCTCGGCTGCCGCACACTGGACGGCGGCACCATGGCGGTGTTCCAGGCGGTGAAGGCATTCGAACTGTTCAGCGGGGTGGCGGCCGACGCCGCGCGCATGCAGGCGCACTTCGCCAGCCTGGGCGACTGA
PROTEIN sequence
Length: 285
MSAPRSVLAGLIGAGIQASRTPALHEREGDAQGIRYLYRLIDLDPLGKSADDLEFLLAAASDLGFTGLNVTFPCKQAIIPLLDDLSAEARGIGAVNTVVLRDGRRIGHNTDCLGFAEGFRRGLADAPRQRVVQMGAGGAGAAVAHALLAEGVERLVLFDVDPARAQALADNLNQHFGAPRALAGSDLAGALGDAQGLVNTTPVGMAKLPGMPVPAELLRADLWVAEVIYFPLETELLRQARALGCRTLDGGTMAVFQAVKAFELFSGVAADAARMQAHFASLGD*