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NECEvent2014_5_3_scaffold_1836_4

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(1535..2443)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=103 Tax=Pseudomonas RepID=G4LIM8_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 302.0
  • Bit_score: 596
  • Evalue 1.20e-167
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:CDH80275.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aer similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 302.0
  • Bit_score: 596
  • Evalue 2.20e-167
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 302.0
  • Bit_score: 595
  • Evalue 1.00e-167

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
GTGAATATCCAAACCTTCGACCTCAACCTGCTACGCGTCCTTGACGCGCTGCTGCGCGAACGCAACGTCTCGCGCGCGGCGGAGCGCCTGGCGCTGAGCCAGCCGGCAGTGAGCAATGCGCTGAACCGCCTGCGCGAGCTGCTCGACGACCCGCTGCTGGTCCGCGCCGGTCGTGCGATGCAGCCGACGCCCCGGGCGCTGGCGCTGGAAGCGCCGATCCGCGCGGCGCTGCGGCAGATCGAACAGAGCCTGGGCGACGGCGAGGGCTTCGATCCGGGGCGCAGCCGGCAGCGCTTCACCGTAGCGGTGACCGACTACGTCGAACTGATCTGCATGCCCGCCCTGATGCGCCGCCTGAGTGAGCGGGCGCCGGGAATCTCCATCGCCATCCAGCACCTGACCCCGACCTTGCCGGCCGAGGCGCTGGACAAAGGCGAACTGGACCTGGTGCTAGGCCGCTTCGAAAACGTCCCGGCGCGCTTCCAGCGCCGCCATTGGGCCAGCGAGACCCTGCAACTGGTCGCCCGGCGTCAGCACCCGCTGCTGGCGCAGGCTCCCGACCTGGCCACCTTCCTGGAGCTGCAGCACCTGTGGGTGCACGGCGGGCAGACCAAGGGGATGGTCGACCAGTGGCTGGGCAGCCAGGGGCTCAAGCGGCAAGTGGCCTACACCACGCCGAACTACCTGCAGGCAGCGCACATCGCCGCGTACAGCGACCTGGTCGGCGTCCTGCCGCGACAACTGGCGCACTACTTCGAACGATTGCTGCCCCTGCAATCGTTCGACCTGCCGTTCGACCTCGGCCCGTTCCACCTGGAACTGGTGTTTCTGGCCCAGCGCGAACGCGACATCGCCCTGCAATGGCTGGTCGAACAGATCCGCCAGGTCGGGGCCGCCGGACCGGACTAG
PROTEIN sequence
Length: 303
VNIQTFDLNLLRVLDALLRERNVSRAAERLALSQPAVSNALNRLRELLDDPLLVRAGRAMQPTPRALALEAPIRAALRQIEQSLGDGEGFDPGRSRQRFTVAVTDYVELICMPALMRRLSERAPGISIAIQHLTPTLPAEALDKGELDLVLGRFENVPARFQRRHWASETLQLVARRQHPLLAQAPDLATFLELQHLWVHGGQTKGMVDQWLGSQGLKRQVAYTTPNYLQAAHIAAYSDLVGVLPRQLAHYFERLLPLQSFDLPFDLGPFHLELVFLAQRERDIALQWLVEQIRQVGAAGPD*