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NECEvent2014_5_3_scaffold_1908_2

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(94..396)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit alpha n=135 Tax=Pseudomonas RepID=IHFA_PSEA7 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 100.0
  • Bit_score: 199
  • Evalue 1.90e-48
ihfA; integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 100.0
  • Bit_score: 199
  • Evalue 5.30e-49
Integration host factor subunit alpha {ECO:0000255|HAMAP-Rule:MF_00380}; Short=IHF-alpha {ECO:0000255|HAMAP-Rule:MF_00380};; TaxID=208963 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudo similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 100.0
  • Bit_score: 199
  • Evalue 2.60e-48

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGGGGGCTCTGACGAAAGCTGAAATTGCGGAACGTCTGTACGAAGAGCTGGGCCTGAACAAACGGGAAGCCAAGGAGTTGGTGGAGCTGTTCTTCGAAGAGATCCGCCAGGCGCTGGAGCACAACGAGCAGGTCAAGCTGTCCGGTTTCGGCAACTTCGACCTGCGCGACAAGCGCCAGCGCCCCGGACGCAACCCGAAGACCGGTGAAGAAATCCCGATCACGGCCCGCCGCGTTGTCACCTTTCGTCCAGGGCAGAAACTGAAGGCCAGGGTTGAGGCATATGCTGGAACCAAGTCATAA
PROTEIN sequence
Length: 101
MGALTKAEIAERLYEELGLNKREAKELVELFFEEIRQALEHNEQVKLSGFGNFDLRDKRQRPGRNPKTGEEIPITARRVVTFRPGQKLKARVEAYAGTKS*