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NECEvent2014_5_3_scaffold_1177_2

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: 852..1745

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix , lysR family protein n=59 Tax=Pseudomonas RepID=T2E6H4_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 297.0
  • Bit_score: 579
  • Evalue 1.50e-162
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 297.0
  • Bit_score: 579
  • Evalue 4.30e-163
Putative transcriptional regulator {ECO:0000313|EMBL:CKG90475.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 297.0
  • Bit_score: 579
  • Evalue 2.10e-162

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGGAGCTTGCCGTCCCCACCTCCCAATCCCTGGATATCGTGTTGTTGCGTACCTTTCTCGAAGTGGTCGACAGCGGCGGTTTCGCCCTCGCCGCGGACAATCTCGCGCTCACCCCCTCCGCAGTCAGCGGGCATATCAAGCGCCTGGAACAGACAGCCGGCGTCAGCCTGCTCAGCCGCACCACTCGCCGCCTGGAGCTGACCCAGGCGGGCGAGACGCTCTACGCCTATGCCCGCAACATCGTCGAGCTGGAGCGCGAGGCCCGCGCCAGGCTGCACGGCACGCCGATCCGCGACCGCCTGCGCATCGGCGCTTCGGAGGACTTCGCCAGCGCCTGGCTGCCACGCGTCCTGCAACGCTTTCGCCGCTGGCACCCCGAAGCATCCATCGAACTCAAGGTCGGTATCACCACCGACCTGCTCCGCCAGCAGGCCCAGGGGCGCACCGACGTGGTGTTCGGCAAGCAGTGCCGGCGGGTAGGAGACGACGGCGAACTGCTCTGGGAGGAACCGCTGGTCTGGGCCGCGGCGACCGCGATCGAGCTGCCCGCGGGCGAACCGCTGCCGCTGGCGCTGTTCCCCGAACCCTGCGTCTACCGCGAAGCGGCGATTACAGCCCTCGGCGCCGCTGCGCGACCCTGGCGCCTGGTGTTCGAGAGCGCCAGCATGGCCGGCTGCCTGTCCGCCGCGCTGGCCGGTTTCGCCGTGACGGTGGTGGCGCGCAGCCAGATGCGCGAGGGGCTGCGCGAACTGGGCCCGGAACAGGGTTTTCCGACGCTGCCGGAGGCGCGTTTCTACGCCTTCTCGCGCCAACCCAGCCTGGCGGCCGATGCCCTGATCGAGGCGGTGCGGCAGCTCGGCCAGCGCAGTCGCTTCGTTACCGCACAGGGATGA
PROTEIN sequence
Length: 298
MELAVPTSQSLDIVLLRTFLEVVDSGGFALAADNLALTPSAVSGHIKRLEQTAGVSLLSRTTRRLELTQAGETLYAYARNIVELEREARARLHGTPIRDRLRIGASEDFASAWLPRVLQRFRRWHPEASIELKVGITTDLLRQQAQGRTDVVFGKQCRRVGDDGELLWEEPLVWAAATAIELPAGEPLPLALFPEPCVYREAAITALGAAARPWRLVFESASMAGCLSAALAGFAVTVVARSQMREGLRELGPEQGFPTLPEARFYAFSRQPSLAADALIEAVRQLGQRSRFVTAQG*