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NECEvent2014_5_3_scaffold_1228_2

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(236..718)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulatory protein AlgQ n=109 Tax=Pseudomonas RepID=ALGQ_PSEAE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 160.0
  • Bit_score: 329
  • Evalue 1.90e-87
  • rbh
algQ; anti-RNA polymerase sigma 70 factor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 160.0
  • Bit_score: 329
  • Evalue 5.40e-88
Transcriptional regulatory protein AlgQ {ECO:0000313|EMBL:ERV75172.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="P similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 160.0
  • Bit_score: 329
  • Evalue 2.70e-87

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGCTCGAAAGCTGCCGTAATGCCCAAGAGCGGTGGGGGGGTGTGCACCAACTGATCGATCGCTGGCTGCATGAGCGCCAGCAACTGGTGCAGGCCTTCGATGCCCTGAGCGGTATTCAGGCACCGGCGCCCAACGCCGAAGAACTCCAGCATTTCTGCCAATTGCTGCTGGACTACGTATCTGCCGGACACTTCGAGGTCTACGAGCAACTGACGGCGGAAGGCAAGGCCTTCGGCGATCAGCGCGGCCTGGAGCTGGCCAAGCAGATCTTCCCCCGGCTGGAAGCCATCACCGAATCCGCGCTGAACTTCAACGACCGCTGCGACAACGGCGATTGCCGTGAAGGAGCCTGCCTCATCGCGGAGCTGAAGGTCCTGCGGCAACAGTTGCACGAACGCTTCGAGCTGGAGGACTGCCTCATCGAAGTCCTGCACAACGCCCACAGCCAGAGCGGCGCAGAGGGTTCGGCAGTACCGGTCTGA
PROTEIN sequence
Length: 161
MLESCRNAQERWGGVHQLIDRWLHERQQLVQAFDALSGIQAPAPNAEELQHFCQLLLDYVSAGHFEVYEQLTAEGKAFGDQRGLELAKQIFPRLEAITESALNFNDRCDNGDCREGACLIAELKVLRQQLHERFELEDCLIEVLHNAHSQSGAEGSAVPV*