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NECEvent2014_5_3_scaffold_2362_1

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(1..645)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-fimbriae usher protein n=1 Tax=Pseudomonas aeruginosa 18A RepID=M1YJW1_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 215.0
  • Bit_score: 446
  • Evalue 1.40e-122
Sigma-fimbriae usher protein similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 215.0
  • Bit_score: 445
  • Evalue 1.20e-122
Putative type 1 pili usher protein CsuD {ECO:0000313|EMBL:CKI15574.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 215.0
  • Bit_score: 445
  • Evalue 5.90e-122

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
GTGCCTCGCCCGTGTCAGCGGCGCTCTCGCCGCCACCGCTCGCTACTGATCGGCCTGGCGCTGCTCTCCCCTGTCCATGCGGCGGACTACCTGGCCGGACTGCCGCCGCCGCAACCCGCTCCGTCCGGCGGCGGCAACGTCCTCTACTACCTGGAACTGGTGATCAACGGCCGCGACAGCGGCCAGGTGGTGCCGGTCAACGCCGCCGATGGCCATTACCTGCTCGACGCCGCGGCCCTGCGCGAAGCCGGCGTGCGCCTGCCTGGCAACCCCGCCGGACAGGTCGCGGTGGACGCCCTGCCCGAGGTCCGGGCGGACTATGACAGCGCCAGCCAGCAACTGCACCTGCAAGTGCCGCCGGACTGGCTGCCGGAGCAGCGCTTCGACGATCCCGGACTGGTCGCCCGCGCCCCGGCGCGCAGCAGCCTCGGCGCGCTGTTCAACTACGACCTGTACTACTCGGACCCCGCCGACGGCGCCACGCCCTGGCTTTCCGCGCTGCTCGAGCAACGCCTGTTCGACGGCTTCGGGGTGATCTCCAACACCGGCGTCTACACCCGCTATTTCGGCGACGCCGACAACCTCGACAGCCGCTACCTGCGCTACGACACCTACTGGCTGTACAACGACGAACGCAACATGCAC
PROTEIN sequence
Length: 215
VPRPCQRRSRRHRSLLIGLALLSPVHAADYLAGLPPPQPAPSGGGNVLYYLELVINGRDSGQVVPVNAADGHYLLDAAALREAGVRLPGNPAGQVAVDALPEVRADYDSASQQLHLQVPPDWLPEQRFDDPGLVARAPARSSLGALFNYDLYYSDPADGATPWLSALLEQRLFDGFGVISNTGVYTRYFGDADNLDSRYLRYDTYWLYNDERNMH