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NECEvent2014_5_3_scaffold_2444_3

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: 688..1860

Top 3 Functional Annotations

Value Algorithm Source
Translocator protein PopB n=58 Tax=Pseudomonas RepID=B7VBH0_PSEA8 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 390.0
  • Bit_score: 720
  • Evalue 7.20e-205
  • rbh
Type III secretion host injection protein (YopB) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 390.0
  • Bit_score: 720
  • Evalue 2.00e-205
  • rbh
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI77071.1}; Translocator protein PopB {ECO:0000313|EMBL:CEI19699.1}; Type III secretion host injection protein YopB {ECO:0000313|EMBL:B similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 390.0
  • Bit_score: 720
  • Evalue 1.00e-204

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1173
ATGAATCCGATAACGCTTGAACGCGCCGGACTGCCCTACGGGGTGGCCGACGCCGGGGATATCCCGGCGCTCGGCAGGCCGGTCGCGAGGGATGTCGAGAGTCTGCGGGTGGAGCGCCTGGCGGCGCCGGCCGCGGCTTCCGCGAGCGGCACGGGGGTGGCGCTGACGCCGCCGTCCGCAGCCAGCCAGCAGCGCCTGGAGGTCGCCAATCGTGCGGAGATCGCCAGCCTGGTGCAAGCAGTGGGCGAGGATGTCGGACTGGCGCGGCAGGTTGTGCTGGCCGGCGCTTCGACGCTGTTGTCCGCCGGCCTGATGTCGCCGCAGGCGTTCGAGATCGAGCTGGCGAAAATCACCGGCGAAGTCGAGAACCAGCAGAAGAAACTCAAGCTGACCGAAATCGAGCAGGCGCGAAAGCAGAACCTGCAGAAAATGGAGGACAACCAGCAGAAGATCAGGGAATCGGAAGAAGCCGCGAAAGAAGCCCAGAAGTCCGGTCTGGCAGCCAAAATCTTTGGTTGGATCAGTGCAATAGCTTCGATCATCGTCGGCGCAATCATGGTGGCAACCGGCGTCGGCGCGGCCGCGGGTGCACTGATGATCGCGGGCGGTGTCATGGGAGTGGTCTCCCAGTCGGTACAGCAGGCAGCCGCGGACGGATTGATCAGCAAGGAAGTGATGGAAAAGCTCGGCCCGGCACTGATGGGTATCGAGATCGCCGTCGCGCTGCTGGCGGCGGTGGTCAGCTTCGGCGGCTCAGCGGTCGGCGGGCTGGCCAGACTGGGCGCGAAGATCGGCGGCAAGGCGGCCGAGATGACCGCCAGCCTGGCGAGCAAGGTCGCCGACCTGGGCGGCAAGTTCGGCAGTTTGGCCGGCCAATCGCTGTCGCACTCGCTGAAACTCGGCGTGCAGGTTTCCGACCTGACCCTGGACGTCGCCAACGGCGCGGCCCAGGCCACTCATTCGGGATTCCAGGCGAAGGCCGCGAACCGCCAGGCCGACGTGCAGGAATCGCGTGCCGACCTGACCACCCTGCAGGGCGTGATCGAGCGCCTGAAGGAAGAGCTGAGCCGCATGCTGGAAGCATTCCAGGAAATCATGGAGCGGATCTTCGCCATGCTCCAGGCCAAGGGTGAAACCCTGCACAACCTGTCCAGCCGACCGGCAGCGATCTGA
PROTEIN sequence
Length: 391
MNPITLERAGLPYGVADAGDIPALGRPVARDVESLRVERLAAPAAASASGTGVALTPPSAASQQRLEVANRAEIASLVQAVGEDVGLARQVVLAGASTLLSAGLMSPQAFEIELAKITGEVENQQKKLKLTEIEQARKQNLQKMEDNQQKIRESEEAAKEAQKSGLAAKIFGWISAIASIIVGAIMVATGVGAAAGALMIAGGVMGVVSQSVQQAAADGLISKEVMEKLGPALMGIEIAVALLAAVVSFGGSAVGGLARLGAKIGGKAAEMTASLASKVADLGGKFGSLAGQSLSHSLKLGVQVSDLTLDVANGAAQATHSGFQAKAANRQADVQESRADLTTLQGVIERLKEELSRMLEAFQEIMERIFAMLQAKGETLHNLSSRPAAI*