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NECEvent2014_5_3_scaffold_1014_1

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: 2..253

Top 3 Functional Annotations

Value Algorithm Source
Drug efflux transporter n=4 Tax=Pseudomonas aeruginosa RepID=U8M3U5_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 83.0
  • Bit_score: 172
  • Evalue 2.00e-40
Inner membrane component of tripartite multidrug resistance system similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 83.0
  • Bit_score: 172
  • Evalue 5.70e-41
Multidrug resistance protein B {ECO:0000313|EMBL:ETD54301.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 83.0
  • Bit_score: 172
  • Evalue 2.80e-40

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
CACCACGCCTATCTCAGCGAAAACATCAGCCTCTACGACCCGGCCACCCACGAAACCCTCGCCCAGCTCGGCGGCAACACCCAGGCGAACGCGGCGCTGCTCGACAGGATGGTGCAGAGCCAGGCCTACATGATGTCCACCATCGACTACTTCACCATGCTCGGCTGGCTGTTCCTCGCCCTGCTGGTGATCATCTGGCTGGCCCGCCCGCCGTTCGGCGCCAAGCCCGGCGCGGCCGCCTCCGGGCACTGA
PROTEIN sequence
Length: 84
HHAYLSENISLYDPATHETLAQLGGNTQANAALLDRMVQSQAYMMSTIDYFTMLGWLFLALLVIIWLARPPFGAKPGAAASGH*