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NECEvent2014_5_3_scaffold_2631_3

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(1632..2318)

Top 3 Functional Annotations

Value Algorithm Source
OmpA family membrane protein n=3 Tax=Pseudomonas aeruginosa RepID=S0IQM7_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 228.0
  • Bit_score: 450
  • Evalue 1.40e-123
  • rbh
Sodium-type flagellar protein motY precursor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 228.0
  • Bit_score: 450
  • Evalue 3.90e-124
OmpA family membrane protein {ECO:0000313|EMBL:ERV81705.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 228.0
  • Bit_score: 450
  • Evalue 1.90e-123

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATCAACCTTGGCCAGGTCAGCATCGGTAGCGGCGAGGTGCCGTTCAACAGCAGCCAGCAACAGGCCGGTCGGTTGCTCACCGGCCTGCTCGAGGGGCGCAGCCCGCTGGTCCGCCATCGCACCTGGCAGGGCGATCGCCTGGAGGTGCGCCTGCTGCCGGCGCGCTTCGCCAGCGTCTACAGCCAGTACCAGGCCTGCATCGCCAAGCTGCTGCCGGTGAACTTCGACCAGGTCAAGCTGGCCCAGGTCGGCTTCCCCGACGGCGGCACGGCGCTGAACGACGTGGCGCGAGCCAAGCTGGACATCATCCTGCAACTGCTCAAGGCCGATCCGAGCATCAACCGGATCGAACTCGACGGGCACTCCGACAACAGCGGCAACCGCCTGACCAACCGCGACCTGTCGCGCCGCCGCGCGCTGGCGGTGCAGGAGTACCTGAAGAGCAACGGGGTGCCGGAAAGCCAGATCAACGTGCGCTTCTACGGCGAGCGCTACCCGCTGGTGGCCAACAACAGCGCCGCCAACCGTGCGCGCAACCGCCGGGTCACCGTGCACCTGTCGCGCGAGGCGGTGGTCGAGCCGGCGACGGAAGCGCCGAAGGCCGAGGACAAGCCGGCGCCGCCCGCGGCAGAACCTGCCGCACCGAAGCCTCCGGCCGCCTCGCTTCAGGGAAAACCCACGGTTTGA
PROTEIN sequence
Length: 229
INLGQVSIGSGEVPFNSSQQQAGRLLTGLLEGRSPLVRHRTWQGDRLEVRLLPARFASVYSQYQACIAKLLPVNFDQVKLAQVGFPDGGTALNDVARAKLDIILQLLKADPSINRIELDGHSDNSGNRLTNRDLSRRRALAVQEYLKSNGVPESQINVRFYGERYPLVANNSAANRARNRRVTVHLSREAVVEPATEAPKAEDKPAPPAAEPAAPKPPAASLQGKPTV*