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NECEvent2014_5_3_scaffold_2653_5

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(2182..2298)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1457392 species="Bacteria; Proteobacteria; Gam similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 38.0
  • Bit_score: 81
  • Evalue 3.00e-13
Ribonuclease R n=1 Tax=Pseudomonas aeruginosa BL10 RepID=U8J5R8_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 38.0
  • Bit_score: 81
  • Evalue 2.20e-13
3'-to-5' exoribonuclease RNase R similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 38.0
  • Bit_score: 81
  • Evalue 6.10e-14

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 117
CCCGCCGCTGCCGCCAAGCCGGGCAAGCCGACCAAGCATCGCAAGGGGCCTTCCAAGCCGAAGGCCGACAACGCTCCGGCCGCCACCGGGGCGCGCAAACGTAAGGCCAAGTCATGA
PROTEIN sequence
Length: 39
PAAAAKPGKPTKHRKGPSKPKADNAPAATGARKRKAKS*