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NECEvent2014_5_3_scaffold_3342_1

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(6..1016)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=102 Tax=Pseudomonas RepID=M9S6X3_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 336.0
  • Bit_score: 658
  • Evalue 3.80e-186
  • rbh
peptide ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 336.0
  • Bit_score: 658
  • Evalue 1.10e-186
ABC transporter permease {ECO:0000313|EMBL:CKI12497.1}; Dipeptide transport system permease protein DppB {ECO:0000313|EMBL:BAR69812.1}; Peptide ABC transporter permease {ECO:0000313|EMBL:AKE71963.1}; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 336.0
  • Bit_score: 658
  • Evalue 5.30e-186

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGCTTAGTTTCATTGCACGACGATTGGGGTTGCTGATCCCCACCTTCTTCGGCGTGACGCTGCTCACCTTCGCGCTGATCCGCCTGATTCCCGGCGACCCGGTGGAAGTGATGATGGGCGAACGTCGCGTCGATCCGCAGATGCATGCCGAGGCCCTGCACCGCCTGGGCCTGGACAAGCCGTTGTACCAGCAGTACCTGGACTACGTGGGCAACCTGGCACAGGGCAATCTCGGCGAATCGCTGACCACCCGCGAAGGCGTCTGGCACGAATTCCTCACCCTGTTCCCGGCGACCCTGGAACTGTCCCTGGCCGCCATGCTCTTCGCCGGCACCTTCGGTCTGCTGGCCGGGGTGATCGCCGCCCTGAAACGCGGTTCGCTGTTCGACCACGGGGTGATGACGGTGTCCCTCGCCGGCTATTCGATGCCGATCTTCTGGTGGGGCCTGATCCTGATCATGCTGTTCTCCGTGTCGCTGGGCTGGACGCCGGTGTCCGGCCGTCTCGACCTGCTCTACGACATCGAGCCGAAGACCGGCTTCATGCTGATCGACACCCTGCTTTCCGACGAACAGGGCTCGTTCCTCGATGCCGTGCGCCACCTGATCCTGCCGGCCATCGTGCTGGGCACCATCCCGCTGGCGGTGATTGCCCGCATGACCCGCTCGGCGATGCTCGAGGTGCTGCGCGAAGACTATGTGCGCACCGCCCGCGCCAAGGGCCTGTCGCCGGCCCGGGTGGTCTTCGTGCACGCCCTGCGCAACGCGCTGATTCCGGTGCTGACGGTATTCGGCCTGCAGGTCGGCACGCTGCTCGCCGGCGCGGTGCTGACCGAAACCATCTTCTCCTGGCCGGGCATCGGCAAGTGGCTGATCGACGCCATCAGCCGTCGCGACTACCCGGTGGTGCAGAACGGCATCCTGCTGGTCGCCACCCTGGTCATCCTGGTCAATTTCGTCGTGGACATCCTCTACGGCCTGGCCAACCCGCGCATTCGCCACCAACGCTGA
PROTEIN sequence
Length: 337
MLSFIARRLGLLIPTFFGVTLLTFALIRLIPGDPVEVMMGERRVDPQMHAEALHRLGLDKPLYQQYLDYVGNLAQGNLGESLTTREGVWHEFLTLFPATLELSLAAMLFAGTFGLLAGVIAALKRGSLFDHGVMTVSLAGYSMPIFWWGLILIMLFSVSLGWTPVSGRLDLLYDIEPKTGFMLIDTLLSDEQGSFLDAVRHLILPAIVLGTIPLAVIARMTRSAMLEVLREDYVRTARAKGLSPARVVFVHALRNALIPVLTVFGLQVGTLLAGAVLTETIFSWPGIGKWLIDAISRRDYPVVQNGILLVATLVILVNFVVDILYGLANPRIRHQR*