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NECEvent2014_5_3_scaffold_1330_1

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(3..464)

Top 3 Functional Annotations

Value Algorithm Source
DNA packaging protein n=4 Tax=Pseudomonas aeruginosa RepID=V5T1B3_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 141.0
  • Bit_score: 278
  • Evalue 4.90e-72
Putative small subunit (Nu1 homolog) of DNA packaging dimer {ECO:0000313|EMBL:CEI01776.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomo similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 154.0
  • Bit_score: 307
  • Evalue 1.40e-80
DNA packaging protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 141.0
  • Bit_score: 278
  • Evalue 1.40e-72

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGTATGACCTTTTTTCGGAGGTTGGTTGTTGTTTTGTCATGAGCACAGAAGACCTCCAAAAAAAGCGCGGGTGGCTGAACAAGTCCGAGATGGCCGCGAGCCTCGGGATTTCTCCGCAAGCCTTTGATAAATGGGGCGTTGAGCCTGCCGCCAAGATCGGCCGCGAGGTGTTCTATACCGCCCAGGCGGTGCTACAGAATCGCCTCGATCATGCGACCCAGAAACAACAACCTGAGGGCCTAGATGCGGAAGGTCTCGACCCGCTCGCTGAAAAGAAATTGCTACAGGAGCGCCTGCGACTGACGACTGCTCAGGCTGACGCCCAGGAGCAGAAGAACCAGGTCCAAGCGAAGACCCTTGTTCCGACTCCGTTCGCCACCTTCGCTCTTGCCAGGATCGCGTCCAAGATCGGCTCGAAACTGGAGACGGTCTGCAAGACGGTCCGCAGCCAAATACCCGAT
PROTEIN sequence
Length: 154
MYDLFSEVGCCFVMSTEDLQKKRGWLNKSEMAASLGISPQAFDKWGVEPAAKIGREVFYTAQAVLQNRLDHATQKQQPEGLDAEGLDPLAEKKLLQERLRLTTAQADAQEQKNQVQAKTLVPTPFATFALARIASKIGSKLETVCKTVRSQIPD