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NECEvent2014_5_3_scaffold_1393_3

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: 3305..4093

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=3 Tax=Pseudomonas aeruginosa RepID=U8QNL2_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 263.0
  • Bit_score: 512
  • Evalue 2.60e-142
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:AHW69532.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aer similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 263.0
  • Bit_score: 512
  • Evalue 3.70e-142
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 263.0
  • Bit_score: 510
  • Evalue 2.80e-142

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGGACACCCTGCAAAACATGCGAGCCTTCGTCTGCGTGGCGGAAACCGGAAGCTTCACCGCGGCGTCCCAGCAGCTCAACACCACCACCGCCTATGTTTCGCGGGCGGTGGCCAACCTCGAGACGCACCTGCGCACCCGCCTGCTCAACCGTACCACTCGTCGCATCGCCCTCACCGAGGCCGGCCAGCGCTACCTGCTGCGCTGCGAGCAGATCCTCGCCTACGTCGAGGAAGCCGAGGCCGAAGCCAGCGATGCCCATGCCCGTCCCGCCGGCAAGCTGAAGCTGCATTCGATGACCGGCATCGGCCAGCACTACGTGATCCGTGCCATCGCCGGCTACCGCCAGCAGTACCGCGACGTGACCTTCGATCTGACCATGGCCAACCGCGTGCCGGACCTGCTCGACGAGGGCTTCGACGTGGCCATCGTGGTGGCCTCCGAGCTGCCCGATTCCGGCTTCATTTCCCAGCGCATCGGCGAGACCTACAGCATTCTTTGCGCCTCGCCGGAGTACCTGAGCCTGAACGGCACGCCGAGCGAGCCTTCGGAGCTGGCCAGCCACGACTGCCTGCGCCTGGTCAGCCCGGTGGTGCCGCTGGATCGCTGGCTGTTCGACGGTCCCAACGGCCAGGAAATGGTCTCCATCGGCGCCTCGCCGTTCCAGGTCAATGTCGGCGACGCCATGACCGAGGCAATCCGCTCCGGGCTGGGCATCGGTATCCTGCCGGTGTATTCGGCCATCGAGGACCTGGGCAAGGGCACCCTGGTGCGGGTCCTGCCGCAACAC
PROTEIN sequence
Length: 263
MDTLQNMRAFVCVAETGSFTAASQQLNTTTAYVSRAVANLETHLRTRLLNRTTRRIALTEAGQRYLLRCEQILAYVEEAEAEASDAHARPAGKLKLHSMTGIGQHYVIRAIAGYRQQYRDVTFDLTMANRVPDLLDEGFDVAIVVASELPDSGFISQRIGETYSILCASPEYLSLNGTPSEPSELASHDCLRLVSPVVPLDRWLFDGPNGQEMVSIGASPFQVNVGDAMTEAIRSGLGIGILPVYSAIEDLGKGTLVRVLPQH