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NECEvent2014_5_3_scaffold_3649_1

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: 3..1643

Top 3 Functional Annotations

Value Algorithm Source
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=24 Tax=Pseudomonas RepID=MNMC_PSEAE similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 517.0
  • Bit_score: 938
  • Evalue 4.00e-270
  • rbh
5-methylaminomethyl-2-thiouridine-forming enzyme mnmC similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 517.0
  • Bit_score: 938
  • Evalue 1.10e-270
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000255|HAMAP-Rule:MF_01102}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000255|HAMAP-Rule:MF_011 similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 517.0
  • Bit_score: 938
  • Evalue 5.60e-270

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1641
CTGTTCGTCGAGAGCAACCTGCGCCGCGCCCTGGCGCTATGGCCGGAACTGGCGCCCTGGAGCGAGGCCCTGCTGGGCCAGTACCTTGCCGTGCACCCGGGCTTCCAGCGCCTGGCGTTCGCGGGCGGAAGGGTCGGCCTGACCCTGCTGCTGGGCGATGCCCTGGAGTGCCTGCCGCAGCTCGACGCGCGGGTCGACGCCTGGTTCCTCGATGGCTTCGCCCCGGCGAAGAACCCGGACATGTGGTCGCCCGTACTGTTCGCCGAACTGGCGCGACTGTCGGCGCCGCAGGCGACCCTGGGCACCTTCACCAGCGCCGGTTTCGTCCGCCGCGGGCTGGTCGAGGCCGGTTTCGCCATGCAACGGGTACCGGGCTACGGACAGAAGCGCGAGATGCTCAGCGGCACCTACCAGGGGCCGCCGGCGAACGCCGGCAAGCCCTGGTACGCACGCCCCGCGCCCCACGCCGGGCGCCGCGCGGCACTGGTGGTCGGCGGCGGCCTGGCCGGCTGCGCCAGCGCCGCCAGCCTCGCCGCGCGCGGCTGGCAGGTGACCCTGATCGAACGCCATCCCGGCCTCGCCCGGGAAGCCTCGGGCAACCCCCAGGGCGTGCTCTACCTGAAACTCTCGGCCCACGGCACGCCGCTGTCGCGCCTGGTGCTCAGCGGCTTCGGCCATACCCGCCGGCTGCTCGAACGCCTGCGGCGCGGCCACGACTGGGACGCCTGCGGCGTACTGCAACTGGCCTTCGACGCCAAGGAAGCGCAACGCCAGGCGCAACTGGCCGCAGCCTTCCCCGCCGACCTGCTGCACGGCCTGGAGCGCGAGCAGGCCGAGCGCCTCGCCGGCGTCGCCCTGCCCGCCGGCGGCCTGTTCTATCCCGAAGCCGGCTGGGTCCATCCGCCCGCGCTGTGCCAGGCCCTGGCCGCCACCCCCGGGATCACCCTGCTGAGCGGCCGGGCAGTACGCTTGCGCCGCGAGGGCGACGACTGGTGCGCCTACGCCGGCGACGAATGCCTGGCCCGCGCGCCACTCGCGATCCTCGCCACCGCCGCCGACATCCGCGACTTCCCGCCCGCCGCCGAGCTGCCGCTGAAGCGCATTCGCGGGCAGGTCACCCGCCTGCCGGCCACCCCGCAAAGCCGGGCGCTGCGCACCGTGGTCTGCGCCGAGGGCTACGTCGCACCGCCGCGTGGCGACGAACACACCCTCGGCGCCAGCTTCGACTTCAAGAGCGAAGACCTGGCGCCGACCCTCGCCGAACACCAGGGCAACCTCGAACTGCTGCGGGAAATATCCCCCGACCTGTTGCAGCGCCTGGGCGCCGACGACCTGCCGCTGGAGCGCCTGGAAGGCCGCGCGGCATTCCGCTGCACCAGCCCCGACTACCTGCCCCTGGCTGCCAGGCCTGTACCTGAACAGCGGCCACGGCTCGCGCGGGCTGATCAGTGCGCCGCTGTCCGGCGAACTGCTGGCGGCGTGGATCTGCGGCGAGCCGCTGCCGCTGCCGCGCGCGGTGGCCGAGGCCTGCCACCCGAACCGCTTCCTGCTGCGCGACCTGGTGCGCGGGCAGCGCGGCTGAAGCCCCGGGCGCACCGATTTGCGCTACCCTTCGGGCCTGCCGCACGCGCAGGCCATACC
PROTEIN sequence
Length: 547
LFVESNLRRALALWPELAPWSEALLGQYLAVHPGFQRLAFAGGRVGLTLLLGDALECLPQLDARVDAWFLDGFAPAKNPDMWSPVLFAELARLSAPQATLGTFTSAGFVRRGLVEAGFAMQRVPGYGQKREMLSGTYQGPPANAGKPWYARPAPHAGRRAALVVGGGLAGCASAASLAARGWQVTLIERHPGLAREASGNPQGVLYLKLSAHGTPLSRLVLSGFGHTRRLLERLRRGHDWDACGVLQLAFDAKEAQRQAQLAAAFPADLLHGLEREQAERLAGVALPAGGLFYPEAGWVHPPALCQALAATPGITLLSGRAVRLRREGDDWCAYAGDECLARAPLAILATAADIRDFPPAAELPLKRIRGQVTRLPATPQSRALRTVVCAEGYVAPPRGDEHTLGASFDFKSEDLAPTLAEHQGNLELLREISPDLLQRLGADDLPLERLEGRAAFRCTSPDYLPLAARPVPEQRPRLARADQCAAVRRTAGGVDLRRAAAAAARGGRGLPPEPLPAARPGARAARLKPRAHRFALPFGPAARAGHT