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NECEvent2014_5_3_scaffold_1946_2

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: 647..1120

Top 3 Functional Annotations

Value Algorithm Source
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12) similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 157.0
  • Bit_score: 312
  • Evalue 6.70e-83
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=86 Tax=Pseudomonas RepID=ISPF_PSEA8 similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 157.0
  • Bit_score: 312
  • Evalue 2.40e-82
  • rbh
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000255|HAMAP-Rule:MF_00107}; Short=MECDP-synthase {ECO:0000255|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000255|HAMAP-Rule:MF_00107} similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 157.0
  • Bit_score: 312
  • Evalue 3.30e-82

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGCGAATTGGCCATGGCTACGACGTGCATCGCTTCGGCGAGGGCGACTTCATCACCCTCGGCGGCGTGCGCATTCCCCACAAACATGGGCTGGTCGCCCACTCCGACGGCGACGTGCTGCTGCACGCCTTGTCCGATGCGCTGCTCGGCGCGGCGGCGCTGGGCGACATCGGCAAGCACTTCCCGGACACCGACCCGCGGTTCAAGGGCGCCGACAGTCGCGCGCTGCTGCGACACGTGGTCGCCATCGTCGCCGAGAAGGGCTGGAAGGTCGGCAACGTCGATGCCACCATCGTCGCCCAGGCGCCGAAGATGGCGCCGCACATCGAGACCATGCGCGGGTTGATCGCCGAGGACCTCGGCGTCGCGGTCGACCAGGTCAACGTCAAGGCCACCACTACCGAGCGGCTAGGTTTCACCGGACGCGAAGAGGGCACTGCTGTACATGTGGTCGCTTTGCTGATGGCCCGATGA
PROTEIN sequence
Length: 158
MRIGHGYDVHRFGEGDFITLGGVRIPHKHGLVAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPRFKGADSRALLRHVVAIVAEKGWKVGNVDATIVAQAPKMAPHIETMRGLIAEDLGVAVDQVNVKATTTERLGFTGREEGTAVHVVALLMAR*