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NECEvent2014_5_3_scaffold_1986_1

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: 2..229

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=19 Tax=Pseudomonas RepID=G2UJ90_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 75.0
  • Bit_score: 153
  • Evalue 8.90e-35
dipeptide ABC transporter, permease protein DppC similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 75.0
  • Bit_score: 153
  • Evalue 2.50e-35
Dipeptide transporter membrane component of ABC superfamily {ECO:0000313|EMBL:CEG52983.1}; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 75.0
  • Bit_score: 153
  • Evalue 1.20e-34

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Taxonomy

Pseudomonas xanthomarina → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 228
TCCACAACCGTGCTGCTGGAGGCGACCCTGTCGTTCCTCGGCGTGGGCGTACAGCCGCCGACGCCGAGCTGGGGCAACATCATCTTCGAGAGCCAGACCTACTTCACCGAGGCGCCCTGGCTGGTGTTCTTTCCCGGGGCGGCCATCGTGCTGCTGTCGCTGGCCTTCAACCTGGTGGGCGACGCATTGCGCGACGAGCTCGACCCGACCCTGTCGGGGAGACGCTGA
PROTEIN sequence
Length: 76
STTVLLEATLSFLGVGVQPPTPSWGNIIFESQTYFTEAPWLVFFPGAAIVLLSLAFNLVGDALRDELDPTLSGRR*