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NECEvent2014_5_3_scaffold_2018_2

Organism: NECEvent2014_5_3_Pseudomonas_aeruginosa_rel_66_7

near complete RP 49 / 55 MC: 3 BSCG 43 / 51 ASCG 13 / 38 MC: 2
Location: comp(1630..2520)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein PchR n=109 Tax=Pseudomonas RepID=PCHR_PSEAE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 296.0
  • Bit_score: 597
  • Evalue 9.10e-168
  • rbh
Transcriptional regulator PchR similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 296.0
  • Bit_score: 597
  • Evalue 2.60e-168
AraC family transcriptional regulator {ECO:0000313|EMBL:AKE67389.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI75106.1}; Regulatory protein PchR {ECO:0000313|EMBL:BAR65640.1}; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 296.0
  • Bit_score: 597
  • Evalue 1.30e-167

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGACCATCACCATCATTGCTCCGCCACAGGCCGATGCCGCCGCGCCGGCACCGGGCAACCGGCCCGGCGTCGCGCACATCGATCCGAACATGAAGCTGGTGACCGGAACCTTCTGTTCGGCCAGCGAGGACTGGTTCGAGGAACCGCTGGAGCGCGGCCTGCGCCTGATCCTCGTGCAGAGCGGCCAGTTGCGCTGCCGGATTCCCGGCCAGCCCGAGCACCTCATCGAGGGGCCGAGCCTGTGCACCATCGCCAACGATGGCGACTTCACCTCGGCGCAGATCTACGGCACCGACAAGCCGTTGCGCTACACCATCGTCCAACTCGGCGTCGAAGCCCTGGACAGCCGCCTCGGCTGGCTGCCCGAGCAACTGATACGCCGCCCCGGCGGCGATCCGCGAATCATGAGCTGCCCGGCGCCGCGGGCGATGCAGGCGTTGGCCTCGCAGATCGCCACCTGCCAGATGCTCGGTCCGACCCGCGATCTCTACCTCGGCGGCAAGGCCCTGGAGTTGGCCGCGCTCAGCGCACAGTTCCTTTCCGGCGAGGGGCGCCCCGTCGAGGAGCCGCGCATCACCTGCTCGGAGGTCGAGCGCATCCACGCCGCCCGCGACCTGCTGGTCGGCGCCTTGCAGGAGCCGCCGTCGCTGGACACGCTGGCCAGCCGCGTGGGCATGAACCCGCGCAAGCTGACTGCCGGCTTTCGCAAGGTGTTCGGCGCCAGCGTATTCGGCTACCTGCAGGAATACCGCCTGCGCGAGGCGCACCGGATGCTCTGCGACGAAGAGGCGAACGTCTCCACGGTGGCCTACCGGGTGGGCTACAGCCCGGCGCATTTCTCCATCGCTTTCCGCAAGCGCTACGGCATCTCCCCCAGCGAGATCCGCTGA
PROTEIN sequence
Length: 297
MTITIIAPPQADAAAPAPGNRPGVAHIDPNMKLVTGTFCSASEDWFEEPLERGLRLILVQSGQLRCRIPGQPEHLIEGPSLCTIANDGDFTSAQIYGTDKPLRYTIVQLGVEALDSRLGWLPEQLIRRPGGDPRIMSCPAPRAMQALASQIATCQMLGPTRDLYLGGKALELAALSAQFLSGEGRPVEEPRITCSEVERIHAARDLLVGALQEPPSLDTLASRVGMNPRKLTAGFRKVFGASVFGYLQEYRLREAHRMLCDEEANVSTVAYRVGYSPAHFSIAFRKRYGISPSEIR*